RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 ZC3H14Q6PJT7 736 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 ALYREFQ86V81 257 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC13Q8IYE1 715 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 ZCCHC9Q8N567 271 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 CNTD1Q8N815 330 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 OR14C36Q8NHC7 312 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 HNRNPLLQ8WVV9 542 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 MAML1Q92585 1016 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 NKD2Q969F2 451 aaPredicted RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 HDAC11Q96DB2 347 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 RBM41Q96IZ5 413 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 MS4A14Q96JA4 679 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 SPACA7Q96KW9 195 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 CAPZA3Q96KX2 299 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 GDAP1L1Q96MZ0 367 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 SLC6A18Q96N87 628 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 QKIQ96PU8 341 aaKnown RBP eCLIP8□□□□□ -1.13
CCDC40-215ENST00000576033 PRRX2Q99811 253 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 OMDQ99983 421 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 MGME1Q9BQP7 344 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 GORASP1Q9BQQ3 440 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 HEPHQ9BQS7 1158 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 ORAI3Q9BRQ5 295 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 FAM126AQ9BYI3 521 aaPredicted RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 KCNH6Q9H252 994 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 CARD9Q9H257 536 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 NOD2Q9HC29 1040 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF446Q9NWS9 450 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 ZFR2Q9UPR6 939 aaKnown RBP8□□□□□ -1.13
CCDC40-215ENST00000576033 COQ6Q9Y2Z9 468 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 PCDHGC4Q9Y5F7 938 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 WDFY3Q8IZQ1 3526 aa8□□□□□ -1.13
CCDC40-215ENST00000576033 CCDC66A2RUB6 948 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 C16orf96A6NNT2 1141 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF487B1APH4 448 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 H0Y8X5 98 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 KCNK3O14649 394 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 MATN3O15232 486 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 MAP3K13O43283 966 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 GFRA3O60609 400 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 EPN2O95208 641 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 JCHAINP01591 159 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 LMNAP02545 664 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 C7P10643 843 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ADRB3P13945 408 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 C5AR1P21730 350 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 PTPN3P26045 913 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 RBL1P28749 1068 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 CD68P34810 354 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 PLA2G5P39877 138 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 MMP13P45452 471 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 RECQLP46063 649 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ZNF135P52742 658 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 GDF10P55107 478 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 SNRPD1P62314 119 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 PPIDQ08752 370 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ITKQ08881 620 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 C2orf54Q08AI8 447 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 WASHC5Q12768 1159 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 KLF1Q13351 362 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 PPP2R5EQ16537 467 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 TTC31Q49AM3 519 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ODF2Q5BJF6 829 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 LYSMD4Q5XG99 296 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 GDPD4Q6W3E5 623 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 BBS12Q6ZW61 710 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 SRLQ86TD4 932 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 MAP7D3Q8IWC1 876 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 RCOR2Q8IZ40 523 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 TAB3Q8N5C8 712 aaPredicted RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 LZTR1Q8N653 840 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 TEX26Q8N6G2 289 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 SPATA22Q8NHS9 363 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ARRDC2Q8TBH0 407 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ACTL9Q8TC94 416 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 PDCD6IPQ8WUM4 868 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 PIGKQ92643 395 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 FUBP1Q96AE4 644 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 FAM131CQ96AQ9 280 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 ISG20Q96AZ6 181 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 BIRC7Q96CA5 298 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 AGAP3Q96P47 875 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 PSKH2Q96QS6 385 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 HINFPQ9BQA5 517 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 WRAP53Q9BUR4 548 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 MAK16Q9BXY0 300 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 MIR1-1HGQ9H1L0 117 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 RETREG1Q9H6L5 497 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 RBM22Q9NW64 420 aaKnown RBP eCLIP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 FAM53CQ9NYF3 392 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 UBP1Q9NZI7 540 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 SEPT3Q9UH03 358 aa7.99□□□□□ -1.13
CCDC40-215ENST00000576033 EIF2B4Q9UI10 523 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 DYNC1LI1Q9Y6G9 523 aaKnown RBP7.99□□□□□ -1.13
CCDC40-215ENST00000576033 FAM186AA6NE01 2351 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 CEP250Q9BV73 2442 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 LRP4O75096 1905 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 ZSCAN5CA6NGD5 496 aaPredicted RBP7.98□□□□□ -1.13
CCDC40-215ENST00000576033 MEI4A8MW99 385 aa7.98□□□□□ -1.13
CCDC40-215ENST00000576033 C10orf142B7Z368 130 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms