RNA–Protein interactions for RNA: ENST00000575426.1

LITAF-217, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 5

Gene LITAF, Length 582 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-217ENST00000575426 RGRP47804 291 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 PPIDQ08752 370 aaKnown RBP15.38■□□□□ 0.05
LITAF-217ENST00000575426 PLA2G2CQ5R387 149 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 NEK5Q6P3R8 708 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 PARS2Q7L3T8 475 aaKnown RBP15.38■□□□□ 0.05
LITAF-217ENST00000575426 KIAA2013Q8IYS2 634 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 TEX26Q8N6G2 289 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 MAML1Q92585 1016 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 FAM131CQ96AQ9 280 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 FEM1CQ96JP0 617 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 NUDCD1Q96RS6 583 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 LGMNQ99538 433 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 MGME1Q9BQP7 344 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 POLR1EQ9GZS1 481 aaKnown RBP15.38■□□□□ 0.05
LITAF-217ENST00000575426 TMEM74BQ9NUR3 256 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 DKK3Q9UBP4 350 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 TTLL3Q9Y4R7 772 aa15.38■□□□□ 0.05
LITAF-217ENST00000575426 TP53BP1Q12888 1972 aaPredicted RBP15.38■□□□□ 0.05
LITAF-217ENST00000575426 PTPRZ1P23471 2315 aaPredicted RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 A0A1B0GTW7 788 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 GOLGA6L9A6NEM1 432 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 MUSKO15146 869 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 RNGTTO60942 597 aaKnown RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 CFIP05156 583 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 PYGMP11217 842 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 CD27P26842 260 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 HOXD11P31277 338 aaPredicted RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 PTPN7P35236 360 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 NUDT1P36639 197 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 SUOXP51687 545 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 TAS2R38P59533 333 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 MAXP61244 160 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 POLR2LP62875 67 aaKnown RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 AASDHQ4L235 1098 aaPredicted RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 TRIM61Q5EBN2 209 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 BRAT1Q6PJG6 821 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 BBS12Q6ZW61 710 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 CAMK1DQ8IU85 385 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 PGBD5Q8N414 524 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 TRIM58Q8NG06 486 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 LRRN4Q8WUT4 740 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 TFB1MQ8WVM0 346 aaKnown RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 ALG3Q92685 438 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 HES6Q96HZ4 224 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 FERMT1Q9BQL6 677 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 PARD6AQ9NPB6 346 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 SEPT10Q9P0V9 454 aa15.37■□□□□ 0.05
LITAF-217ENST00000575426 SAE1Q9UBE0 346 aaPredicted RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 EP300Q09472 2414 aaPredicted RBP15.37■□□□□ 0.05
LITAF-217ENST00000575426 LRRK1Q38SD2 2015 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 WDR87Q6ZQQ6 2873 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 A0A1W2PPC4 97 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 A0A1W2PQ67 120 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 TTC24A2A3L6 582 aaPredicted RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 H7C0C1 242 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 APOC4-APOC2K7ER74 178 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 KCNK1O00180 336 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 BCAT2O15382 392 aaPredicted RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 DDX3YO15523 660 aaKnown RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 MTSS1O43312 755 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 TSPAN6O43657 245 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 AP1G1O43747 822 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 JCHAINP01591 159 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 APOC2P02655 101 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 IGHV4-34P06331 123 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 NFKBIAP25963 317 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 MAT2AP31153 395 aaKnown RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 ATP5OP48047 213 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 ELP6Q0PNE2 266 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 CCDC173Q0VFZ6 552 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 ZNF211Q13398 564 aaPredicted RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 RPS6KA1Q15418 735 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 SF3A2Q15428 464 aaKnown RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 TEAD4Q15561 434 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 SETMARQ53H47 684 aaPredicted RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 SEL1L2Q5TEA6 688 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 PEAR1Q5VY43 1037 aaPredicted RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 SLC23A3Q6PIS1 610 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 PRR23CQ6ZRP0 262 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 ZC3H18Q86VM9 953 aaKnown RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 TRIM69Q86WT6 500 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 ZCCHC9Q8N567 271 aaKnown RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 PDCD6IPQ8WUM4 868 aaKnown RBP15.36■□□□□ 0.05
LITAF-217ENST00000575426 HAUS1Q96CS2 278 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 OLFM3Q96PB7 478 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 SEMA3CQ99985 751 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 SMOC1Q9H4F8 434 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 SLC6A14Q9UN76 642 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 FADS3Q9Y5Q0 445 aa15.36■□□□□ 0.05
LITAF-217ENST00000575426 GPR179Q6PRD1 2367 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 FRYLO94915 3013 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 A0A1W2PQU0 124 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 HACD1B0YJ81 288 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 SYPP08247 313 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 SERPINF2P08697 491 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 TIMP2P16035 220 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 PECAM1P16284 738 aaPredicted RBP15.35■□□□□ 0.05
LITAF-217ENST00000575426 CR2P20023 1033 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 CA4P22748 312 aa15.35■□□□□ 0.05
LITAF-217ENST00000575426 PPP2CBP62714 309 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms