RNA–Protein interactions for RNA: ENST00000572083.5

CCDC40-206, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 816 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-206ENST00000572083 FAM102AQ5T9C2 384 aaPredicted RBP20.13■□□□□ 0.81
CCDC40-206ENST00000572083 FOXR2Q6PJQ5 311 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 LEKR1Q6ZMV7 388 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 VOPP1Q96AW1 172 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 ARHGEF26Q96DR7 871 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 FAM81BQ96LP2 452 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 KLHL32Q96NJ5 620 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 EPAS1Q99814 870 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 AJAP1Q9UKB5 411 aaPredicted RBP20.13■□□□□ 0.81
CCDC40-206ENST00000572083 ACSL6Q9UKU0 697 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 SCN8AQ9UQD0 1980 aa20.13■□□□□ 0.81
CCDC40-206ENST00000572083 FLNCQ14315 2725 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 AREL1O15033 823 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 SUV39H1O43463 412 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 F9P00740 461 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 ITIH1P19827 911 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 PTK2Q05397 1052 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 KLHL40Q2TBA0 621 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 SLC25A52Q3SY17 297 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 SLC47A2Q86VL8 602 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 FAM131BQ86XD5 332 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 ZDHHC17Q8IUH5 632 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 HID1Q8IV36 788 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 FSTL5Q8N475 847 aaPredicted RBP20.12■□□□□ 0.81
CCDC40-206ENST00000572083 TP53I13Q8NBR0 393 aaPredicted RBP20.12■□□□□ 0.81
CCDC40-206ENST00000572083 TSACCQ96A04 125 aaPredicted RBP20.12■□□□□ 0.81
CCDC40-206ENST00000572083 ISG20Q96AZ6 181 aaKnown RBP20.12■□□□□ 0.81
CCDC40-206ENST00000572083 WRAP53Q9BUR4 548 aaKnown RBP20.12■□□□□ 0.81
CCDC40-206ENST00000572083 NDFIP2Q9NV92 336 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 LOXL2Q9Y4K0 774 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 PCDHGA4Q9Y5G9 962 aa20.12■□□□□ 0.81
CCDC40-206ENST00000572083 PRAMEF33A0A0G2JMD5 474 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 BIN1O00499 593 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 PRAMEF10O60809 474 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 TM7SF2O76062 418 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 CTSEP14091 401 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 ITIH2P19823 946 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 CCKBRP32239 447 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 FLT3P36888 993 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 HK3P52790 923 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 CYP4F2P78329 520 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 PAK1Q13153 545 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 IRF4Q15306 451 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 ELOCQ15369 112 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 MANEAQ5SRI9 462 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 ATXN7L2Q5T6C5 722 aaPredicted RBP20.11■□□□□ 0.81
CCDC40-206ENST00000572083 ACBD5Q5T8D3 534 aaPredicted RBP20.11■□□□□ 0.81
CCDC40-206ENST00000572083 XKR5Q6UX68 686 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 NYAP1Q6ZVC0 841 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 RD3Q7Z3Z2 195 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 TTC7BQ86TV6 843 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 OR2AP1Q8NGE2 309 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 CXorf40AQ8TE69 158 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 SCG3Q8WXD2 468 aaKnown RBP20.11■□□□□ 0.81
CCDC40-206ENST00000572083 ARHGEF2Q92974 986 aaKnown RBP20.11■□□□□ 0.81
CCDC40-206ENST00000572083 TIGD1Q96MW7 591 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 HAPLN3Q96S86 360 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 GPR34Q9UPC5 381 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 LRP4O75096 1905 aa20.11■□□□□ 0.81
CCDC40-206ENST00000572083 TMX2-CTNND1H3BSU7 103 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 GSRP00390 522 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 ALPIP09923 528 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 BLKP51451 505 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 POLD3Q15054 466 aaPredicted RBP20.1■□□□□ 0.81
CCDC40-206ENST00000572083 TBR1Q16650 682 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 ALG11Q2TAA5 492 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 C2CD6Q53TS8 623 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 TRNP1Q6NT89 227 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 CREBRFQ8IUR6 639 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 PLPP6Q8IY26 295 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 CFAP57Q96MR6 1250 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 TMEM74Q96NL1 305 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 C1QTNF7Q9BXJ2 289 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 EDEM3Q9BZQ6 932 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 LRRN3Q9H3W5 708 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 FOXJ2Q9P0K8 574 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 COQ6Q9Y2Z9 468 aa20.1■□□□□ 0.81
CCDC40-206ENST00000572083 NVLO15381 856 aaKnown RBP20.09■□□□□ 0.81
CCDC40-206ENST00000572083 WT1P19544 449 aaPredicted RBP20.09■□□□□ 0.81
CCDC40-206ENST00000572083 CLCN1P35523 988 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 ETV5P41161 510 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 SNRPD1P62314 119 aaKnown RBP20.09■□□□□ 0.81
CCDC40-206ENST00000572083 MORC3Q14149 939 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 MYLK3Q32MK0 819 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 GDPD4Q6W3E5 623 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 GBP6Q6ZN66 633 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 ZFAND4Q86XD8 727 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 XYLT1Q86Y38 959 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 Q8N9G6 341 aaPredicted RBP20.09■□□□□ 0.81
CCDC40-206ENST00000572083 OSBPL1AQ9BXW6 950 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 SEPT10Q9P0V9 454 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 PPARGC1AQ9UBK2 798 aaKnown RBP20.09■□□□□ 0.81
CCDC40-206ENST00000572083 DNAI1Q9UI46 699 aa20.09■□□□□ 0.81
CCDC40-206ENST00000572083 SPENQ96T58 3664 aaKnown RBP20.09■□□□□ 0.81
CCDC40-206ENST00000572083 DOPEY2Q9Y3R5 2298 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 GOLGA8SH3BPF8 625 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 EXOC3L4Q17RC7 722 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 LVRNQ6Q4G3 990 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 ENPP7Q6UWV6 458 aa20.08■□□□□ 0.81
CCDC40-206ENST00000572083 ZNF574Q6ZN55 896 aaPredicted RBP20.08■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms