RNA–Protein interactions for RNA: ENST00000570385.1

CTDNEP1-203, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 2

Gene CTDNEP1, Length 529 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-203ENST00000570385 LSSP48449 732 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 RHOAP61586 193 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 PTP4A2Q12974 167 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 KRT31Q15323 416 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 NR0B2Q15466 257 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 KLHL40Q2TBA0 621 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 TAF1BQ53T94 588 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 WDR59Q6PJI9 974 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 RD3Q7Z3Z2 195 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 SLFN11Q7Z7L1 901 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 SLC35F3Q8IY50 421 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF843Q8N446 348 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 FAM174AQ8TBP5 190 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 CXorf40AQ8TE69 158 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 KCNE4Q8WWG9 221 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 TSACCQ96A04 125 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 RAB7BQ96AH8 199 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 HMCESQ96FZ2 354 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 GDAP1L1Q96MZ0 367 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 ZNF578Q96N58 590 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 LENG8Q96PV6 779 aaPredicted RBP8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 EPAS1Q99814 870 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 LRRC61Q9BV99 259 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 SELENOOQ9BVL4 669 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 CLPBQ9H078 707 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 POLR1BQ9H9Y6 1135 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 ASCL3Q9NQ33 180 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 EVA1BQ9NVM1 165 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 CHMP5Q9NZZ3 219 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 ADAM22Q9P0K1 906 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 SIRPGQ9P1W8 387 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 SPASTQ9UBP0 616 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 GULP1Q9UBP9 304 aa8.72□□□□□ -1.01
CTDNEP1-203ENST00000570385 TEX51A0A1B0GUA7 166 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 EME2A4GXA9 379 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 RASA4BC9J798 803 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 YY2O15391 372 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 CCP110O43303 1012 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 RASA4O43374 803 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 IGSF6O95976 241 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 ANXA6P08133 673 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 UNGP13051 313 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 XPAP23025 273 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 RBMS1P29558 406 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 STAT1P42224 750 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 PTPN9P43378 593 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 NSFP46459 744 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 JAM2P57087 298 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 GEMIN4P57678 1058 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 NRG1Q02297 640 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 PPARDQ03181 441 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 C1QBPQ07021 282 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 PTK2BQ14289 1009 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 IRF4Q15306 451 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 SYCP1Q15431 976 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 CYTH1Q15438 398 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 FKBP15Q5T1M5 1219 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 BROXQ5VW32 411 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 SMYD5Q6GMV2 418 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 RBM44Q6ZP01 1051 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 STRADAQ7RTN6 431 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 ZNF677Q86XU0 584 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 HID1Q8IV36 788 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 PLPP6Q8IY26 295 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 LSMEM2Q8N112 164 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 RTL3Q8N8U3 475 aaKnown RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 CENPIQ92674 756 aaPredicted RBP8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 ARHGEF26Q96DR7 871 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 NCAPGQ9BPX3 1015 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 OSBPL1AQ9BXW6 950 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 SLC13A1Q9BZW2 595 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 TTYH3Q9C0H2 523 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 USP29Q9HBJ7 922 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 THSD1Q9NS62 852 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 FANCLQ9NW38 375 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 TMEM51Q9NW97 253 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 GPATCH2LQ9NWQ4 482 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 LHX3Q9UBR4 397 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 SALL4Q9UJQ4 1053 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 PADI4Q9UM07 663 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 DOLKQ9UPQ8 538 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 ENTPD2Q9Y5L3 495 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 CSNK1G3Q9Y6M4 447 aa8.71□□□□□ -1.02
CTDNEP1-203ENST00000570385 LMO7DNF2Z398 122 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 PYCARD-AS1I3L0S3 204 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 J3KR12 359 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 TK2O00142 265 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 TPP1O14773 563 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 DXOO77932 396 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 TNFSF15O95150 251 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 PCCBP05166 539 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 RPIAP49247 311 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 TMPRSS3P57727 454 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 ERVPABLB-1P60509 514 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 RPL7AP62424 266 aaKnown RBP8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 CFHR1Q03591 330 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 RAD51Q06609 339 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 LY6DQ14210 128 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 CLEC16AQ2KHT3 1053 aa8.7□□□□□ -1.02
CTDNEP1-203ENST00000570385 ALG11Q2TAA5 492 aa8.7□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms