RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-218	ENST00000569569	ALG6	Q9Y672	507 aa		13.98	□□□□□ -0.17
HERPUD1-218	ENST00000569569	GOLGA6L6	A8MZA4	724 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	NEMP1	O14524	444 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SLC31A1	O15431	190 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SPOP	O43791	374 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	MFSD11	O43934	449 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	DFNA5	O60443	496 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	BUB1B	O60566	1050 aa	Predicted RBP	13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	MAGEC1	O60732	1142 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	KCNK5	O95279	499 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	PIGN	O95427	931 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	PEX11B	O96011	259 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	WNT1	P04628	370 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	ZNF883	P0CG24	379 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CSRP1	P21291	193 aa	Known RBP	13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	HSPA9	P38646	679 aa	Known RBP	13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	GARS	P41250	739 aa	Known RBP	13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	ABL2	P42684	1182 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CTSK	P43235	329 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	RGR	P47804	291 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SCNN1B	P51168	640 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SUOX	P51687	545 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	FOXK2	Q01167	660 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	GALNT2	Q10471	571 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	ZNF235	Q14590	738 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	TMEM259	Q4ZIN3	620 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	PPM1J	Q5JR12	505 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	MARC1	Q5VT66	337 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	LAYN	Q6UX15	382 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	RAD9B	Q6WBX8	426 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	IQCH	Q86VS3	1027 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	PQLC3	Q8N755	202 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	KLK6	Q92876	244 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CALR3	Q96L12	384 aa	Known RBP	13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	MAK16	Q9BXY0	300 aa	Known RBP	13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SLC17A9	Q9BYT1	436 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	ATP13A3	Q9H7F0	1226 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	TFR2	Q9UP52	801 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	HYOU1	Q9Y4L1	999 aa		13.97	□□□□□ -0.17
HERPUD1-218	ENST00000569569	C3orf70	A6NLC5	250 aa	Predicted RBP	13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	TLR4	O00206	839 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	AREL1	O15033	823 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	MUSK	O15146	869 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CEACAM1	P13688	526 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	TNNT1	P13805	278 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CD59	P13987	128 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	TIMP2	P16035	220 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	MX2	P20592	715 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	HNRNPA2B1	P22626	353 aa	Known RBP	13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	XPA	P23025	273 aa	Predicted RBP	13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CCNC	P24863	283 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SERPINA4	P29622	427 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	BCL2L1	Q07817	233 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	OVGP1	Q12889	678 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	HNRNPD	Q14103	355 aa	Known RBP	13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	IFI16	Q16666	785 aa	Known RBP	13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CFAP58	Q5T655	872 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SEL1L3	Q68CR1	1132 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	TIGD7	Q6NT04	549 aa	Predicted RBP	13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	BRAT1	Q6PJG6	821 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	CAMK1D	Q8IU85	385 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	SLC32A1	Q9H598	525 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	IL21R	Q9HBE5	538 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	TM7SF3	Q9NS93	570 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	HS3ST3A1	Q9Y663	406 aa		13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	ARID1B	Q8NFD5	2236 aa	Predicted RBP	13.96	□□□□□ -0.17
HERPUD1-218	ENST00000569569	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	TSPAN11	A1L157	253 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	BTNL10	A8MVZ5	291 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	KCNK3	O14649	394 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	PSTPIP1	O43586	416 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	PAK4	O96013	591 aa	Predicted RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	KRT1	P04264	644 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	PRLR	P16471	622 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	ZFX	P17010	805 aa	Predicted RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	CR2	P20023	1033 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	AKT2	P31751	481 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	MMP13	P45452	471 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	NOVA1	P51513	510 aa	Known RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	AP1S1	P61966	158 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	POLR2L	P62875	67 aa	Known RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	ELP6	Q0PNE2	266 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	SGCG	Q13326	291 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	SUZ12	Q15022	739 aa	Known RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	UGP2	Q16851	508 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	ZNF423	Q2M1K9	1284 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	RALGPS1	Q5JS13	557 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	SLC9A4	Q6AI14	798 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	C11orf63	Q6NUN7	778 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	PIP4P1	Q86T03	277 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	TMEM139	Q8IV31	216 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	TEX26	Q8N6G2	289 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	TMEM145	Q8NBT3	493 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	TPCN2	Q8NHX9	752 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	FAM174A	Q8TBP5	190 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	TRAF3IP1	Q8TDR0	691 aa	Predicted RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	ASB12	Q8WXK4	309 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	FATE1	Q969F0	183 aa		13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	RNF25	Q96BH1	459 aa	Predicted RBP	13.95	□□□□□ -0.18
HERPUD1-218	ENST00000569569	KLHDC7B	Q96G42	594 aa		13.95	□□□□□ -0.18

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