RNA–Protein interactions for RNA: ENST00000568129.1

HDGFL3-205, Transcript of HDGF like 3, humanhuman

TSL 2

Gene HDGFL3, Length 426 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-205ENST00000568129 DYRK4Q9NR20 520 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TM7SF3Q9NS93 570 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 CTTNBP2NLQ9P2B4 639 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 IPO11Q9UI26 975 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 PCOLCE2Q9UKZ9 415 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 PPIL1Q9Y3C6 166 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ZFC3H1O60293 1989 aaKnown RBP8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 SPEGQ15772 3267 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 ASXL3Q9C0F0 2248 aa8.29□□□□□ -1.08
HDGFL3-205ENST00000568129 TPRP12270 2363 aaKnown RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 H0Y8X5 98 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 KRIT1O00522 736 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 TOR1BO14657 336 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 MUSKO15146 869 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 YKT6O15498 198 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 INSIG1O15503 277 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 FLRT2O43155 660 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 DAPK3O43293 454 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 HTRA2O43464 458 aaPredicted RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SH3BP5O60239 455 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 PALMO75781 387 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 UGT2B4P06133 528 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 CD48P09326 243 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 HNRNPA2B1P22626 353 aaKnown RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 KDELR1P24390 212 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SERPINB6P35237 376 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 HSPA9P38646 679 aaKnown RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC1A1P43005 524 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 RGRP47804 291 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 NOVA1P51513 510 aaKnown RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 DNA2P51530 1060 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 RENBPP51606 427 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 CDH6P55285 790 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 RHOAP61586 193 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC10A7Q0GE19 358 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 GALNT2Q10471 571 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 MMRN1Q13201 1228 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 STAT4Q14765 748 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SUZ12Q15022 739 aaKnown RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 UAP1L1Q3KQV9 507 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 POM121L1PQ3SYA9 428 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SLC45A4Q5BKX6 768 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 ANKRD20A8PQ5CZ79 823 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SEL1L3Q68CR1 1132 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 PSAPL1Q6NUJ1 521 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 BRAT1Q6PJG6 821 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 LEKR1Q6ZMV7 388 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SRLQ86TD4 932 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 DCP2Q8IU60 420 aaKnown RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 OXR1Q8N573 874 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 PQLC3Q8N755 202 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 DEFB124Q8NES8 71 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SAP25Q8TEE9 199 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 MAML1Q92585 1016 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 HSPH1Q92598 858 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 BMFQ96LC9 184 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 KLHL32Q96NJ5 620 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 ELF4Q99607 663 aaPredicted RBP8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 MGME1Q9BQP7 344 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 DEF6Q9H4E7 631 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 ZDHHC6Q9H6R6 413 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 SPTLC3Q9NUV7 552 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 AMACRQ9UHK6 382 aa8.28□□□□□ -1.08
HDGFL3-205ENST00000568129 RP1P56715 2156 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 A0A1W2PQ67 120 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 BTNL10A8MVZ5 291 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 RIOK3O14730 519 aaKnown RBP8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 CCNCP24863 283 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 MAT2AP31153 395 aaKnown RBP8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 GARSP41250 739 aaKnown RBP8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 CCT8P50990 548 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 C21orf59P57076 290 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 PFN3P60673 137 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 AP1S1P61966 158 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 FAM193AP78312 1265 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 ELP6Q0PNE2 266 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 SLC10A2Q12908 348 aaPredicted RBP8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 LBRQ14739 615 aaKnown RBP8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 TRIP6Q15654 476 aaKnown RBP8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 UGP2Q16851 508 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 NCBP2-AS2Q69YL0 99 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 SLC9A4Q6AI14 798 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 LAYNQ6UX15 382 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 GCNT7Q6ZNI0 430 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 TTC7BQ86TV6 843 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 ZSWIM9Q86XI8 627 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 TMTC1Q8IUR5 882 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 NAXDQ8IW45 347 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 MAP7D3Q8IWC1 876 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 PGBD5Q8N414 524 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 DENND6BQ8NEG7 585 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 OR6K2Q8NGY2 324 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 RAPGEF5Q92565 580 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 KLHDC7BQ96G42 594 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 CALR3Q96L12 384 aaKnown RBP8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 RNF157Q96PX1 679 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 NUDCD1Q96RS6 583 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 GDF3Q9NR23 364 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 KLHL11Q9NVR0 708 aa8.27□□□□□ -1.09
HDGFL3-205ENST00000568129 TOR4AQ9NXH8 423 aa8.27□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms