RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ABL2P42684 1182 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 EIF3EP60228 445 aaKnown RBP14.49□□□□□ -0.09
USP3-205ENST00000557884 PPP2CBP62714 309 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 PPP2CAP67775 309 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 DSC2Q02487 901 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 BCL2L1Q07817 233 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 NOMO1Q15155 1222 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 SPDYCQ5MJ68 293 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 KIAA0895LQ68EN5 471 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 ADAT2Q7Z6V5 191 aaKnown RBP14.49□□□□□ -0.09
USP3-205ENST00000557884 SLC35F6Q8N357 371 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 CADM4Q8NFZ8 388 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 RUBCNQ92622 972 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 FOXJ1Q92949 421 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 FAM131CQ96AQ9 280 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 LOXL4Q96JB6 756 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 AGAP3Q96P47 875 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 TUBGCP5Q96RT8 1024 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 IL12RB2Q99665 862 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 SEMA3CQ99985 751 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 MIR1-1HGQ9H1L0 117 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 ITM2BQ9Y287 266 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 PCDHGC4Q9Y5F7 938 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 NUP205Q92621 2012 aa14.49□□□□□ -0.09
USP3-205ENST00000557884 BCLAF3A2AJT9 711 aaKnown RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 GOLGA6L9A6NEM1 432 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 METTL12A8MUP2 240 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 KIF5CO60282 957 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 PCDH8O95206 1070 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 PRKCGP05129 697 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 TIMP2P16035 220 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 XPAP23025 273 aaPredicted RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 CXCR5P32302 372 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 MPLP40238 635 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 MAPK8P45983 427 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 NIPAL4Q0D2K0 466 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 CCDC15Q0P6D6 951 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 GRM3Q14832 879 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 SLC45A4Q5BKX6 768 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 SYCP2LQ5T4T6 812 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 TTC7BQ86TV6 843 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 ZSWIM9Q86XI8 627 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 C17orf53Q8N3J3 647 aaPredicted RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 CNTD1Q8N815 330 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 PDCD6IPQ8WUM4 868 aaKnown RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 BIRC7Q96CA5 298 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 ZNF641Q96N77 438 aaPredicted RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 TMEM74BQ9NUR3 256 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 DKK3Q9UBP4 350 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 EIF2B4Q9UI10 523 aaKnown RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 GGT7Q9UJ14 662 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 R3HDM2Q9Y2K5 976 aaKnown RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 ATP8A1Q9Y2Q0 1164 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 ZBTB32Q9Y2Y4 487 aaPredicted RBP14.48□□□□□ -0.09
USP3-205ENST00000557884 FADS3Q9Y5Q0 445 aa14.48□□□□□ -0.09
USP3-205ENST00000557884 SDK1Q7Z5N4 2213 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 EML5Q05BV3 1969 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 A0A1W2PQU0 124 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 HACD1B0YJ81 288 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 F5H423 210 aaPredicted RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 NEMP1O14524 444 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 SPINT1O43278 529 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 RNGTTO60942 597 aaKnown RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 IGHV4-34P06331 123 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 PTPN3P26045 913 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 RBL1P28749 1068 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 SEMG2Q02383 582 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 SPEM2Q0P670 501 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 WASHC5Q12768 1159 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 TRAF2Q12933 501 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 KLF1Q13351 362 aaPredicted RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 IHHQ14623 411 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 WDR45BQ5MNZ6 344 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 SEL1L3Q68CR1 1132 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 DARS2Q6PI48 645 aaKnown RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 ALYREFQ86V81 257 aaKnown RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 SLC13A5Q86YT5 568 aaPredicted RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 ZCCHC9Q8N567 271 aaKnown RBP14.47□□□□□ -0.09
USP3-205ENST00000557884 ARRDC2Q8TBH0 407 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 UBE2Q2Q8WVN8 375 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 KLK6Q92876 244 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 PCED1AQ9H1Q7 454 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 CARD9Q9H257 536 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 PREBQ9HCU5 417 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 PARD6AQ9NPB6 346 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 HAUS2Q9NVX0 235 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 AMACRQ9UHK6 382 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 PILRBQ9UKJ0 227 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 PCDHGA5Q9Y5G8 931 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 RAI2Q9Y5P3 530 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 SLCO1B1Q9Y6L6 691 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 ABCA7Q8IZY2 2146 aa14.47□□□□□ -0.09
USP3-205ENST00000557884 FANCMQ8IYD8 2048 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 TSPAN11A1L157 253 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 UPK3BL1B0FP48 263 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 PATE3B3GLJ2 98 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 UPK3BL2E5RIL1 263 aa14.46□□□□□ -0.09
USP3-205ENST00000557884 TRAFD1O14545 582 aaPredicted RBP14.46□□□□□ -0.09
USP3-205ENST00000557884 CEP104O60308 925 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms