RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 BCL2L1Q07817 233 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 ITKQ08881 620 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 NSUN2Q08J23 767 aaKnown RBP eCLIP12.24□□□□□ -0.45
SRP54-206ENST00000555317 ELP6Q0PNE2 266 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 DNAH14Q0VDD8 3507 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 GALNT2Q10471 571 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 PAFAH1B3Q15102 231 aaKnown RBP12.24□□□□□ -0.45
SRP54-206ENST00000555317 ERAP2Q6P179 960 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 BRAT1Q6PJG6 821 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 RAD9BQ6WBX8 426 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 CCDC50Q8IVM0 306 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 TP53INP2Q8IXH6 220 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 CCNYQ8ND76 341 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 C1orf216Q8TAB5 229 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 CXorf40AQ8TE69 158 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 FAF2Q96CS3 445 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 PSKH2Q96QS6 385 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 SUV39H2Q9H5I1 410 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 GAREM1Q9H706 876 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 SCUBE2Q9NQ36 999 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 DKK3Q9UBP4 350 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 TFR2Q9UP52 801 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 ANKRD6Q9Y2G4 727 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 TTLL3Q9Y4R7 772 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 HEY1Q9Y5J3 304 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 FADS3Q9Y5Q0 445 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 ALG6Q9Y672 507 aa12.24□□□□□ -0.45
SRP54-206ENST00000555317 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP12.23□□□□□ -0.45
SRP54-206ENST00000555317 RNF103O00237 685 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 CDX4O14627 284 aaPredicted RBP12.23□□□□□ -0.45
SRP54-206ENST00000555317 VILLO15195 856 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 SLC31A1O15431 190 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 MAFKO60675 156 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 MAP3K6O95382 1288 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 NFKBIAP25963 317 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 DYNLT1P63172 113 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 SLC10A7Q0GE19 358 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 KIF5AQ12840 1032 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 TFDP2Q14188 446 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 KIF19Q2TAC6 998 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 HLA-BQ31612 363 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 LRRC73Q5JTD7 316 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 SEL1L3Q68CR1 1132 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 LAYNQ6UX15 382 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 CAMK1DQ8IU85 385 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 PQLC3Q8N755 202 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 CCDC112Q8NEF3 446 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 OR2I1PQ8NGU4 316 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 HCAR2Q8TDS4 363 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 KLK6Q92876 244 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 RNF25Q96BH1 459 aaPredicted RBP12.23□□□□□ -0.45
SRP54-206ENST00000555317 RBM41Q96IZ5 413 aaKnown RBP12.23□□□□□ -0.45
SRP54-206ENST00000555317 RNF157Q96PX1 679 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 MYOCQ99972 504 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 C1QTNF7Q9BXJ2 289 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 SLC32A1Q9H598 525 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 NT5MQ9NPB1 228 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 GDF3Q9NR23 364 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 SLCO1B1Q9Y6L6 691 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 NCOR2Q9Y618 2525 aa12.23□□□□□ -0.45
SRP54-206ENST00000555317 BTNL10A8MVZ5 291 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 UPK3BL1B0FP48 263 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 UPK3BL2E5RIL1 263 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 PPP1R12AO14974 1030 aaPredicted RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 DFNA5O60443 496 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 HNRNPA2B1P22626 353 aaKnown RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 CCNCP24863 283 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 ABL2P42684 1182 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 RGRP47804 291 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 POLR2LP62875 67 aaKnown RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 GBE1Q04446 702 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 OVGP1Q12889 678 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 SLC14A1Q13336 389 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 SUZ12Q15022 739 aaKnown RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 PDK1Q15118 436 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 ZNF284Q2VY69 593 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 INAVAQ3KP66 663 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 PPM1JQ5JR12 505 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 RALGPS1Q5JS13 557 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 BZW1Q7L1Q6 419 aaKnown RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 ERMP1Q7Z2K6 904 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 IQCHQ86VS3 1027 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 KATNAL2Q8IYT4 538 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 MFSD2AQ8NA29 543 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 TPCN2Q8NHX9 752 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 KIAA1524Q8TCG1 905 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 PDCD6IPQ8WUM4 868 aaKnown RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 ORAI3Q9BRQ5 295 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 DESI2Q9BSY9 194 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 SLC17A9Q9BYT1 436 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 POLR1EQ9GZS1 481 aaKnown RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 GOLPH3Q9H4A6 298 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 EBF2Q9HAK2 575 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 DNAAF2Q9NVR5 837 aaKnown RBP12.22□□□□□ -0.45
SRP54-206ENST00000555317 ITM2BQ9Y287 266 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 SNX11Q9Y5W9 270 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 TMEM131Q92545 1883 aa12.22□□□□□ -0.45
SRP54-206ENST00000555317 A0A1W2PQ67 120 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 MACROD2A1Z1Q3 448 aa12.21□□□□□ -0.45
SRP54-206ENST00000555317 GOLGA6L3A6NEY3 463 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms