RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 CST9LP1Q5W188 147 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 ACSM2BQ68CK6 577 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 VSTM1Q6UX27 236 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 RANBP10Q6VN20 620 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 DCDC5Q6ZRR9 648 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 RAPH1Q70E73 1250 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 CCDC170Q8IYT3 715 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 FEZF2Q8TBJ5 459 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 MGARPQ8TDB4 240 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 NSMCE1Q8WV22 266 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 TFAP2BQ92481 460 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 TMEM68Q96MH6 324 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 CFAP57Q96MR6 1250 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 OR2A14Q96R47 310 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 ADOQ96SZ5 270 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 PAFAH2Q99487 392 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 IFIH1Q9BYX4 1025 aaKnown RBP6□□□□□ -1.45
SCFD1-208ENST00000553278 NUF2Q9BZD4 464 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 WSB2Q9NYS7 404 aaPredicted RBP6□□□□□ -1.45
SCFD1-208ENST00000553278 CARD8Q9Y2G2 431 aa6□□□□□ -1.45
SCFD1-208ENST00000553278 EMSYQ7Z589 1322 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 TARSL2A2RTX5 802 aaKnown RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 GTPBP10A4D1E9 387 aaKnown RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 A6NL46 340 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 CHL1O00533 1208 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 ADAMDEC1O15204 470 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PAPSS1O43252 624 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 SEC14L5O43304 696 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PAX4O43316 350 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 NKX2-2O95096 273 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 MT-CYBP00156 380 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 MT-CO3P00414 261 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 EBLN1P0CF75 366 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PTAFRP25105 342 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 MCM7P33993 719 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PTGER1P34995 402 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 CLK1P49759 484 aaKnown RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 ZBTB16Q05516 673 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 DDR1Q08345 913 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 DRAP1Q14919 205 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 ME3Q16798 604 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PCGF3Q3KNV8 242 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PLK5Q496M5 336 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 IGSF11Q5DX21 431 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 AARS2Q5JTZ9 985 aaKnown RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 SPDYAQ5MJ70 313 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 KRT79Q5XKE5 535 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PLBD1Q6P4A8 553 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 TMEM65Q6PI78 240 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 TDRPQ86YL5 185 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 C16orf71Q8IYS4 520 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 FAM185AQ8N0U4 392 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 CCAR2Q8N163 923 aaKnown RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 OR52N4Q8NGI2 321 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 TMEM170AQ8WVE7 144 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 MRPS27Q92552 414 aaKnown RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 ZNF622Q969S3 477 aaKnown RBP eCLIP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 MOAP1Q96BY2 351 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PABPC5Q96DU9 382 aaKnown RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 FER1L6-AS2Q96M78 137 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 ZNF347Q96SE7 839 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 DNAI2Q9GZS0 605 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 PLEKHA4Q9H4M7 779 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 CXorf56Q9H5V9 222 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 COPS7BQ9H9Q2 264 aaPredicted RBP5.99□□□□□ -1.45
SCFD1-208ENST00000553278 SETD4Q9NVD3 440 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 ARL8BQ9NVJ2 186 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 OSGIN1Q9UJX0 560 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 FBXO4Q9UKT5 387 aa5.99□□□□□ -1.45
SCFD1-208ENST00000553278 NPIPB11E5RHQ5 1161 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 DDAH2O95865 285 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 FYNP06241 537 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 PTMAP06454 111 aaKnown RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 PCNAP12004 261 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 ACTN1P12814 892 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 AKR1A1P14550 325 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 ZNF182P17025 639 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 ZFP36P26651 326 aaKnown RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 TLX1P31314 330 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 HNF4AP41235 474 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 UBXN1Q04323 297 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 GRAPQ13588 217 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 E2F5Q15329 346 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 COL28A1Q2UY09 1125 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 MMEL1Q495T6 779 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 FBLN7Q53RD9 439 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 CXorf66Q5JRM2 361 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 ABHD17BQ5VST6 288 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 KIAA0895LQ68EN5 471 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 LAIR1Q6GTX8 287 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 ZNF804AQ7Z570 1209 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 BCDIN3DQ7Z5W3 292 aaKnown RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 RFX6Q8HWS3 928 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 EPHX4Q8IUS5 362 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 ARHGEF19Q8IW93 802 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 PAQR4Q8N4S7 273 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 GOLGA6L2Q8N9W4 650 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 SLC25A43Q8WUT9 341 aaPredicted RBP5.98□□□□□ -1.45
SCFD1-208ENST00000553278 ASB10Q8WXI3 467 aa5.98□□□□□ -1.45
SCFD1-208ENST00000553278 Q96MF0 132 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 82.3 ms