RNA–Protein interactions for RNA: ENST00000546304.1

PRKDC-211, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 2

Gene PRKDC, Length 589 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-211ENST00000546304 CISD3P0C7P0 127 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 ERCC2P18074 760 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 MSNP26038 577 aaKnown RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 SERPINB6P35237 376 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 ETFBP38117 255 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 CDKN2BP42772 138 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 HCAR3P49019 387 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 NUMBP49757 651 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 GALK1P51570 392 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 RWDD2BP57060 319 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 GNA12Q03113 381 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 SLC12A1Q13621 1099 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 DMC1Q14565 340 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 PPP2R5EQ16537 467 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 PARP15Q460N3 678 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 CYP27C1Q4G0S4 372 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 FBXO43Q4G163 708 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 HS1BP3Q53T59 392 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 NCBP2-AS2Q69YL0 99 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 TMCO3Q6UWJ1 677 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 MFSD7Q6UXD7 560 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 ZNF783Q6ZMS7 281 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 Q6ZS52 159 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 ADIPOR2Q86V24 386 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 CCDC50Q8IVM0 306 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 UBL4BQ8N7F7 174 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 OR7D4Q8NG98 312 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 EXD1Q8NHP7 514 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 TRAF3IP1Q8TDR0 691 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 ISL2Q96A47 359 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 HES6Q96HZ4 224 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 CELF6Q96J87 481 aaKnown RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 LMLNQ96KR4 655 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 PSMG3-AS1Q96PY0 264 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 NOL6Q9H6R4 1146 aaKnown RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 FBRSL1Q9HCM7 1045 aaKnown RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 RBM12Q9NTZ6 932 aaKnown RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 KIAA1522Q9P206 1035 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 DNAI1Q9UI46 699 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 INTS6Q9UL03 887 aaKnown RBP6.47□□□□□ -1.37
PRKDC-211ENST00000546304 MFHAS1Q9Y4C4 1052 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 FRYLO94915 3013 aa6.47□□□□□ -1.37
PRKDC-211ENST00000546304 EML5Q05BV3 1969 aa6.46□□□□□ -1.37
PRKDC-211ENST00000546304 hCG_1818297A0A087WSY0 165 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 A0A0D9SEW6 157 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 FAM86C2PA6NEL3 165 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 RASA4BC9J798 803 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 K7EQS6 105 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 APOL1O14791 398 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 RASA4O43374 803 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 RNGTTO60942 597 aaKnown RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ASLP04424 464 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ATP5BP06576 529 aaKnown RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 DLDP09622 509 aaKnown RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 CHRNB1P11230 501 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 POLR2EP19388 210 aaKnown RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 AOC1P19801 751 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 KDELR1P24390 212 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 IL4RP24394 825 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 NTF4P34130 210 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 PTPN7P35236 360 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ACVRL1P37023 503 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 KIR2DL1P43626 348 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 NDST2P52849 883 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 DYNLT1P63172 113 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 SULT2A1Q06520 285 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 CDK5R2Q13319 367 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 POLD3Q15054 466 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 RPS6KA1Q15418 735 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 TAZQ16635 292 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ANKRD20A8PQ5CZ79 823 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 TFDP3Q5H9I0 405 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 DGKKQ5KSL6 1271 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 MEI1Q5TIA1 1274 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 DCAF12L1Q5VU92 463 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 RNF219Q5W0B1 726 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 AFMIDQ63HM1 303 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 EGFLAMQ63HQ2 1017 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 TMEM215Q68D42 235 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 MBLAC2Q68D91 279 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 SLC9A4Q6AI14 798 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 SPOCD1Q6ZMY3 1216 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 TRMT11Q7Z4G4 463 aaKnown RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 KIAA0907Q7Z7F0 614 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ZNF354CQ86Y25 554 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 RFX6Q8HWS3 928 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ARHGAP12Q8IWW6 846 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 APCDD1Q8J025 514 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 UMODL1-AS1Q8N2C9 162 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 C17orf53Q8N3J3 647 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ATPAF2Q8N5M1 289 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 PQLC3Q8N755 202 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 PLD5Q8N7P1 536 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ZNF513Q8N8E2 541 aaPredicted RBP6.46□□□□□ -1.38
PRKDC-211ENST00000546304 PCDH19Q8TAB3 1148 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 CCDC26Q8TAB7 109 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 CYB5D2Q8WUJ1 264 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 UCMAQ8WVF2 138 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 SORCS1Q8WY21 1168 aa6.46□□□□□ -1.38
PRKDC-211ENST00000546304 ALG14Q96F25 216 aa6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms