RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 GPBP1Q86WP2 473 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 TRIM69Q86WT6 500 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 DCP2Q8IU60 420 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 WDR49Q8IV35 697 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 MMAAQ8IVH4 418 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 FAM217AQ8IXS0 508 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 GPD1LQ8N335 351 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ARHGAP18Q8N392 663 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ZNF366Q8N895 744 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 C9orf43Q8TAL5 461 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 KCTD13Q8WZ19 329 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 UBE2FQ969M7 185 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ARRDC3Q96B67 414 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 CALML4Q96GE6 196 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ACCSQ96QU6 501 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 MRPL45Q9BRJ2 306 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 MMTAG2Q9BU76 263 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 KRTAP4-5Q9BYR2 181 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 B3GNT4Q9C0J1 378 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 DPEP3Q9H4B8 488 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 CSNK1G1Q9HCP0 422 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 TMEM30AQ9NV96 361 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 UCKL1Q9NWZ5 548 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 CLIC5Q9NZA1 410 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 SEL1LQ9UBV2 794 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 SERGEFQ9UGK8 458 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 CYTH4Q9UIA0 394 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 RASAL2Q9UJF2 1139 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 AGO1Q9UL18 857 aaKnown RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 PLAAQ9Y263 795 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 PRKAB1Q9Y478 270 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 CSNK1G3Q9Y6M4 447 aa4.22□□□□□ -1.73
SNHG1-220ENST00000544550 ARID1BQ8NFD5 2236 aaPredicted RBP4.22□□□□□ -1.73
SNHG1-220ENST00000544550 LY6G6EA0A0G2JKS1 128 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 EDDM13A0A1B0GTR0 161 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TYW5A2RUC4 315 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CPED1A4D0V7 1026 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF233A6NK53 670 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TISP43B9A030 160 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TPP1O14773 563 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 MDM4O15151 490 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PLRG1O43660 514 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TGFB1P01137 390 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 IL1BP01584 269 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ESR1P03372 595 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 KLKB1P03952 638 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CENPBP07199 599 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CD3EP07766 207 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 SRPRAP08240 638 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 SNRPB2P08579 225 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 GIMD1P0DJR0 217 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 P4HA1P13674 534 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 IFNGR1P15260 489 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 HOXD9P28356 352 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 SLC6A4P31645 630 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 AKT2P31751 481 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ATICP31939 592 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CCKBRP32239 447 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 UGT1A5P35504 534 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 DCTP40126 519 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ECI1P42126 302 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PSMD8P48556 350 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 MAP3K7CLP57077 242 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PCBP3P57721 371 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PPP2CBP62714 309 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 PPP2CAP67775 309 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC15Q0P6D6 951 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 KLRB1Q12918 225 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TRPC3Q13507 836 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ALCAMQ13740 583 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 DHX8Q14562 1220 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ELAVL3Q14576 367 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TGIF1Q15583 401 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CDKN3Q16667 212 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 MSMPQ1L6U9 139 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 WDR72Q3MJ13 1102 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TMEM119Q4V9L6 283 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 MPP7Q5T2T1 576 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 L1TD1Q5T7N2 865 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 FAM46CQ5VWP2 391 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 RNF219Q5W0B1 726 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 GUSBP11Q6P575 273 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 RNF111Q6ZNA4 994 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 ZNF720Q7Z2F6 126 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 MAMDC2Q7Z304 686 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC186Q7Z3E2 898 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 HEATR4Q86WZ0 1026 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 DENND1CQ8IV53 801 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 CCDC117Q8IWD4 279 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 SLC34A3Q8N130 599 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 AADATQ8N5Z0 425 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TMEM145Q8NBT3 493 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 NOC3LQ8WTT2 800 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 HTR3CQ8WXA8 447 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 SYAP1Q96A49 352 aaPredicted RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 SAAL1Q96ER3 474 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 TMA16Q96EY4 203 aaKnown RBP4.21□□□□□ -1.74
SNHG1-220ENST00000544550 P2RY11Q96G91 374 aa4.21□□□□□ -1.74
SNHG1-220ENST00000544550 C8orf76Q96K31 380 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms