RNA–Protein interactions for RNA: ENST00000544429.5

DDX55-211, Transcript of DEAD-box helicase 55, humanhuman

TSL 4

Gene DDX55, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-211ENST00000544429 ZNF830Q96NB3 372 aaPredicted RBP19.34■□□□□ 0.69
DDX55-211ENST00000544429 IL12RB2Q99665 862 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 OSBPL8Q9BZF1 889 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 SUV39H2Q9H5I1 410 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 CAPN10Q9HC96 672 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 LZTFL1Q9NQ48 299 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 DYRK4Q9NR20 520 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 SLCO1B1Q9Y6L6 691 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 LRRK1Q38SD2 2015 aa19.34■□□□□ 0.69
DDX55-211ENST00000544429 ATXN2Q99700 1313 aaKnown RBP19.33■□□□□ 0.69
DDX55-211ENST00000544429 MEI4A8MW99 385 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 FOXD2O60548 495 aaPredicted RBP19.33■□□□□ 0.68
DDX55-211ENST00000544429 CD27P26842 260 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 MAOBP27338 520 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 ABL2P42684 1182 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 IHHQ14623 411 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 PRKD1Q15139 912 aaPredicted RBP19.33■□□□□ 0.68
DDX55-211ENST00000544429 LLGL1Q15334 1064 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 KAZNQ674X7 775 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 PRR23CQ6ZRP0 262 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 ZSWIM9Q86XI8 627 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 CAMK1DQ8IU85 385 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 CCDC50Q8IVM0 306 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 BBS5Q8N3I7 341 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 ATP13A3Q9H7F0 1226 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 EIF2B4Q9UI10 523 aaKnown RBP19.33■□□□□ 0.68
DDX55-211ENST00000544429 ATP8A1Q9Y2Q0 1164 aa19.33■□□□□ 0.68
DDX55-211ENST00000544429 ADAMTS9Q9P2N4 1935 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 A0A1W2PPC4 97 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 FAM47DPA6NHR8 397 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 PATE3B3GLJ2 98 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 APOC4-APOC2K7ER74 178 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 PPP1R12AO14974 1030 aaPredicted RBP19.32■□□□□ 0.68
DDX55-211ENST00000544429 HTRA2O43464 458 aaPredicted RBP19.32■□□□□ 0.68
DDX55-211ENST00000544429 APOC2P02655 101 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 TIMP2P16035 220 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 SCNN1BP51168 640 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 ZBTB17Q13105 803 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 TMEM259Q4ZIN3 620 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 AADACL2Q6P093 401 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 FBXL19Q6PCT2 694 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 BZW1Q7L1Q6 419 aaKnown RBP19.32■□□□□ 0.68
DDX55-211ENST00000544429 RABEPKQ7Z6M1 372 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 UBL4BQ8N7F7 174 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 CNTD1Q8N815 330 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 CCNYQ8ND76 341 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 CEP76Q8TAP6 659 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 HINFPQ9BQA5 517 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 HEMGNQ9BXL5 484 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 SMOC1Q9H4F8 434 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 NOD2Q9HC29 1040 aa19.32■□□□□ 0.68
DDX55-211ENST00000544429 TP53BP1Q12888 1972 aaPredicted RBP19.32■□□□□ 0.68
DDX55-211ENST00000544429 CEP250Q9BV73 2442 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3DA0A087WVF3 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3IA0A087WXS9 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3EA0A087X179 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3KA0A087X1G2 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 TTC24A2A3L6 582 aaPredicted RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3FA6NER0 549 aaPredicted RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3LB9A6J9 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 KCNK1O00180 336 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 SOCS5O75159 536 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 FSBPO95073 299 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 HLA-DQB2P05538 268 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 SERPINF2P08697 491 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3HP0C7X1 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 SERPINA4P29622 427 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 SUOXP51687 545 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 MAXP61244 160 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 KLF1Q13351 362 aaPredicted RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 NOMO1Q15155 1222 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 SF3A2Q15428 464 aaKnown RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 DUOXA1Q1HG43 343 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 ZNF284Q2VY69 593 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 MEI1Q5TIA1 1274 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3GQ6DHY5 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3CQ6IPX1 549 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TCEAL6Q6IPX3 200 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 BRAT1Q6PJG6 821 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 REXO1L1PQ8IX06 675 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TBC1D3Q8IZP1 549 aaPredicted RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 ARRDC2Q8TBH0 407 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 P3H4Q92791 437 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 TCEAL3Q969E4 200 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 POLR1EQ9GZS1 481 aaKnown RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 NT5MQ9NPB1 228 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 RBM22Q9NW64 420 aaKnown RBP eCLIP19.31■□□□□ 0.683e-13■■■■■ 30.2
DDX55-211ENST00000544429 SUSD2Q9UGT4 822 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 ZFR2Q9UPR6 939 aaKnown RBP19.31■□□□□ 0.68
DDX55-211ENST00000544429 KNL1Q8NG31 2342 aa19.31■□□□□ 0.68
DDX55-211ENST00000544429 DNAH14Q0VDD8 3507 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 DCHS1Q96JQ0 3298 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 A0A1B0GTW7 788 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 LNP1A1A4G5 178 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 CES1P23141 567 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 NUDT1P36639 197 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 IRX4P78413 519 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 BCL2L1Q07817 233 aa19.3■□□□□ 0.68
DDX55-211ENST00000544429 XRCC4Q13426 336 aa19.3■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms