RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 MAN1C1Q9NR34 630 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CLIC5Q9NZA1 410 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 IL37Q9NZH6 218 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 SLC2A6Q9UGQ3 507 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 VPS28Q9UK41 221 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 PPM1HQ9ULR3 514 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CDYLQ9Y232 598 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 MIA3Q5JRA6 1907 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 GOLGA8QA0A0J9YX86 632 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CCDC78A2IDD5 438 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 RGSL1A5PLK6 1076 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 GOLGA8OA6NCC3 632 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 F8W810 466 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 GOLGA8NF8WBI6 632 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 SYN3O14994 580 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CA12O43570 354 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 BUD23O43709 281 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 PMPCBO75439 489 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 MOCS2O96007 188 aaPredicted RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 C7P10643 843 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TFEBP19484 476 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CDC25CP30307 473 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 AVPR1AP37288 418 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 LEPRP48357 1165 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 NAGLUP54802 743 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TBX4P57082 545 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TAS2R39P59534 338 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 XIAPP98170 497 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TBL3Q12788 808 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 DLG1Q12959 904 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 CCNIQ14094 377 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 LSM12Q3MHD2 195 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TSTD2Q5T7W7 516 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 NEPROQ6NW34 567 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 C16orf89Q6UX73 402 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 DHDDSQ86SQ9 333 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 RP9Q8TA86 221 aaKnown RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TADA1Q96BN2 335 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 NXNL1Q96CM4 212 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TSPAN17Q96FV3 270 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 ELMO2Q96JJ3 720 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 NR1H4Q96RI1 486 aaPredicted RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 VCXQ9H320 206 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 VCX3BQ9H321 246 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 ZDHHC7Q9NXF8 308 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 ABI2Q9NYB9 513 aaPredicted RBP6.61□□□□□ -1.35
PTPRO-208ENST00000542557 NCKIPSDQ9NZQ3 722 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 MPP6Q9NZW5 540 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 POMPQ9Y244 141 aa6.61□□□□□ -1.35
PTPRO-208ENST00000542557 TRPC5OSA6NMA1 111 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 B4GALT3O60512 393 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 TADA2AO75478 443 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 OR4Q2P0C623 313 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SAT1P21673 171 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 ATP5F1P24539 256 aaPredicted RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 CHRNA4P43681 627 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 GLRBP48167 497 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SERPINH1P50454 418 aaKnown RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 EPHB1P54762 984 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SLC12A2P55011 1212 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 CACNB2Q08289 660 aaPredicted RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 MTA1Q13330 715 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 MSLNQ13421 630 aaPredicted RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 PLEKHG6Q3KR16 790 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 TECRLQ5HYJ1 363 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 MS4A13Q5J8X5 152 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SCN4BQ8IWT1 228 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 COLGALT2Q8IYK4 626 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 ATP6V0D2Q8N8Y2 350 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 KDM1BQ8NB78 822 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 PEX13Q92968 403 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 ARMC5Q96C12 935 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 FAR2Q96K12 515 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 LENG8Q96PV6 779 aaPredicted RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 OMDQ99983 421 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 OLA1Q9NTK5 396 aaKnown RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 STK39Q9UEW8 545 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 ZDHHC2Q9UIJ5 367 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 GABRQQ9UN88 632 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 NOD1Q9Y239 953 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SH3BP1Q9Y3L3 701 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 LOC100653049A0A140TA62 436 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SLC7A4O43246 635 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 KRT34O76011 436 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 PDE5AO76074 875 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 PDHA1P08559 390 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SLC26A3P40879 764 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 FLT3LGP49771 235 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 RPL26P61254 145 aaKnown RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 FAM189BP81408 668 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 PFKPQ01813 784 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 GALNT1Q10472 559 aaPredicted RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 CDC16Q13042 620 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 SEPT6Q14141 434 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 ZNF460Q14592 562 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 RFTN1Q14699 578 aaPredicted RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 TRIP4Q15650 581 aaPredicted RBP6.6□□□□□ -1.35
PTPRO-208ENST00000542557 FAM83EQ2M2I3 478 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 NOMO2Q5JPE7 1267 aa6.6□□□□□ -1.35
PTPRO-208ENST00000542557 MAP3K21Q5TCX8 1036 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms