RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 WDR72Q3MJ13 1102 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 ZNF568Q3ZCX4 644 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 ATF7IP2Q5U623 682 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 MPZL3Q6UWV2 235 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 LRIG3Q6UXM1 1119 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 SATL1Q86VE3 508 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 SLC47A2Q86VL8 602 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 SLC22A9Q8IVM8 553 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 TCAIMQ8N3R3 496 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 CAMKK1Q8N5S9 505 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 IL17RDQ8NFM7 739 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 TRAF3IP1Q8TDR0 691 aaPredicted RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 SEPT8Q92599 483 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PPP1R16BQ96T49 567 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 ZNF717Q9BY31 904 aaPredicted RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 FZD8Q9H461 694 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 TFB2MQ9H5Q4 396 aaKnown RBP12.74□□□□□ -0.37
DDX55-206ENST00000539934 TMBIM4Q9HC24 238 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 SLC35C2Q9NQQ7 365 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 TINAGQ9UJW2 476 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 CNTNAP2Q9UHC6 1331 aa12.74□□□□□ -0.37
DDX55-206ENST00000539934 PSMD11O00231 422 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 O00370 1275 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 CCRL2O00421 344 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 ATP5HO75947 161 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 CKBP12277 381 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 RPL5P46777 297 aaKnown RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 MBTD1Q05BQ5 628 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 PXDC1Q5TGL8 231 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 MEI1Q5TIA1 1274 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 CREG2Q8IUH2 290 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 GSPT2Q8IYD1 628 aaKnown RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 FOXJ1Q92949 421 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 GON7Q9BXV9 100 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 SLC13A1Q9BZW2 595 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 ACP6Q9NPH0 428 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 SLC38A7Q9NVC3 462 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 PRMT7Q9NVM4 692 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 TAS2R14Q9NYV8 317 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 PACSIN2Q9UNF0 486 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 TRIM33Q9UPN9 1127 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 ERGIC3Q9Y282 383 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 KLF2Q9Y5W3 355 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 DCHS1Q96JQ0 3298 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 A0A087WZ62 844 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 HEATR9A2RTY3 570 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 DBX1A6NMT0 343 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 B4GALT5O43286 388 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 CCDC22O60826 627 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 CCNDBP1O95273 360 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 IQCF3P0C7M6 154 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 CYP11B1P15538 503 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 POU3F3P20264 500 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 PTX3P26022 381 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 NOS3P29474 1203 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 TRHRP34981 398 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 GARSP41250 739 aaKnown RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 PAFAH1B1P43034 410 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 ARFIP1P53367 373 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 DEFB103AP81534 67 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 KRT17Q04695 432 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 SURF1Q15526 300 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 IYDQ6PHW0 289 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 LRRC74BQ6ZQY2 392 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 STRA8Q7Z7C7 330 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 ADCK1Q86TW2 530 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 CDR2LQ86X02 465 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 THNSL1Q8IYQ7 743 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 GJD3Q8N144 294 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 OR5B17Q8NGF7 314 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 TPCN2Q8NHX9 752 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 RFFLQ8WZ73 363 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 HES6Q96HZ4 224 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 ZNF317Q96PQ6 595 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 DDX50Q9BQ39 737 aaKnown RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 FDXACB1Q9BRP7 624 aaPredicted RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 C1QTNF7Q9BXJ2 289 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 NFKBIZQ9BYH8 718 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 MINDY3Q9H8M7 445 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 GNPTGQ9UJJ9 305 aa12.73□□□□□ -0.37
DDX55-206ENST00000539934 NOCTQ9UK39 431 aaKnown RBP12.73□□□□□ -0.37
DDX55-206ENST00000539934 ANK1P16157 1881 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 H3BQ06 376 aaPredicted RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 PDE2AO00408 941 aaPredicted RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 PDPK1O15530 556 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 FAM189A1O60320 539 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 VNN1O95497 513 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 VTNP04004 478 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 HLA-FP30511 346 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 SEC13P55735 322 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 RPL26P61254 145 aaKnown RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 PURAQ00577 322 aaKnown RBP12.72□□□□□ -0.37
DDX55-206ENST00000539934 DUSP4Q13115 394 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 CBLBQ13191 982 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 TRPC3Q13507 836 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 DMC1Q14565 340 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 C16orf72Q14CZ0 275 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 GRIK4Q16099 956 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 MAPKAPK3Q16644 382 aa12.72□□□□□ -0.37
DDX55-206ENST00000539934 RBM44Q6ZP01 1051 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms