RNA–Protein interactions for RNA: ENST00000533242.1

NEDD8-207, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

TSL 1 (best)

Gene NEDD8, Length 2,300 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-207ENST00000533242 C12orf29Q8N999 325 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 SORCS1Q8WY21 1168 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 CCT6BQ92526 530 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 BIRC7Q96CA5 298 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 CABS1Q96KC9 395 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 BTBD1Q9H0C5 482 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 RAB6CQ9H0N0 254 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 SGK2Q9HBY8 427 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 GGA2Q9UJY4 613 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 USP3Q9Y6I4 520 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 NUMA1Q14980 2115 aa8.4□□□□□ -1.06
NEDD8-207ENST00000533242 C3orf70A6NLC5 250 aaPredicted RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 GOLGA8SH3BPF8 625 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 VILLO15195 856 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 RRP8O43159 456 aaKnown RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 TLX3O43711 291 aaPredicted RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 HMBSP08397 361 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 CD48P09326 243 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 BCAT1P54687 386 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 RPS14P62263 151 aaKnown RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 ACTN3Q08043 901 aaPredicted RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 INCA1Q0VD86 236 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 EFEMP1Q12805 493 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 MTM1Q13496 603 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 TAF5Q15542 800 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 FNDC3BQ53EP0 1204 aaKnown RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 ANKRD20A8PQ5CZ79 823 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 GKAP1Q5VSY0 366 aaPredicted RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 SPOCD1Q6ZMY3 1216 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 CACNA2D3Q8IZS8 1091 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 CNPY4Q8N129 248 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 ARHGAP18Q8N392 663 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 EMC1Q8N766 993 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 PLD4Q96BZ4 506 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 ELAC2Q9BQ52 826 aaKnown RBP8.4□□□□□ -1.07
NEDD8-207ENST00000533242 ORAI3Q9BRQ5 295 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 TMEM121Q9BTD3 319 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 NRSN2Q9GZP1 204 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 DNAI2Q9GZS0 605 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 TMEM245Q9H330 911 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 EURLQ9NYK6 297 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 GGT7Q9UJ14 662 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 STRIP2Q9ULQ0 834 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 CLEC4EQ9ULY5 219 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 SCINQ9Y6U3 715 aa8.4□□□□□ -1.07
NEDD8-207ENST00000533242 hCG_1818297A0A087WSY0 165 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 CAPN9O14815 690 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 YKT6O15498 198 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 RFPL3O75679 317 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 LDOC1O95751 146 aaPredicted RBP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 JUPP14923 745 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 HNRNPH1P31943 449 aaKnown RBP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 MAN1A1P33908 653 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 CDKN2BP42772 138 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 GDF10P55107 478 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 C21orf59P57076 290 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 GOLGA4Q13439 2230 aaKnown RBP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 RTP5Q14D33 572 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 MPPE1Q53F39 396 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 ZFYVE27Q5T4F4 411 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 KIAA0895LQ68EN5 471 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 DNAJC24Q6P3W2 148 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 CAPN12Q6ZSI9 719 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 PIGWQ7Z7B1 504 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 SPATS2Q86XZ4 545 aaKnown RBP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 DENND1CQ8IV53 801 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 DDX51Q8N8A6 666 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 ANKRD42Q8N9B4 389 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 C3orf20Q8ND61 904 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 SNIP1Q8TAD8 396 aaKnown RBP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 DDI1Q8WTU0 396 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 CNDP2Q96KP4 475 aaKnown RBP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 CPXM1Q96SM3 734 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 RBM15Q96T37 977 aaKnown RBP eCLIP8.39□□□□□ -1.07
NEDD8-207ENST00000533242 NT5C1AQ9BXI3 368 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 DUSP16Q9BY84 665 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 IMPG2Q9BZV3 1241 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 CYP3A43Q9HB55 503 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 IP6K2Q9UHH9 426 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 NAALADL1Q9UQQ1 740 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 RAI2Q9Y5P3 530 aa8.39□□□□□ -1.07
NEDD8-207ENST00000533242 LRRD1A4D1F6 860 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CAPN8A6NHC0 703 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 LRCH4O75427 683 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 DNTTP04053 509 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 PECAM1P16284 738 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 CDH5P33151 784 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 RAD23BP54727 409 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 DYNLT1P63172 113 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 RACK1P63244 317 aaKnown RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 IL9RQ01113 521 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SLC25A11Q02978 314 aaKnown RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 OASLQ15646 514 aaKnown RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 ZNF776Q68DI1 518 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 DCUN1D2Q6PH85 259 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 LAYNQ6UX15 382 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 SYDE1Q6ZW31 735 aaPredicted RBP8.38□□□□□ -1.07
NEDD8-207ENST00000533242 MICALCLQ6ZW33 695 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 GSTA5Q7RTV2 222 aa8.38□□□□□ -1.07
NEDD8-207ENST00000533242 KIAA0907Q7Z7F0 614 aaPredicted RBP8.38□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms