RNA–Protein interactions for RNA: ENST00000527949.1

NR1H3-230, Transcript of nuclear receptor subfamily 1 group H member 3, humanhuman

TSL 2 BASIC

Gene NR1H3, Length 1,065 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H3-230ENST00000527949 TPI1P60174 286 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 E2F1Q01094 437 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 POM121L1PQ3SYA9 428 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 TMCO4Q5TGY1 634 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 KYAT3Q6YP21 454 aaKnown RBP11.28□□□□□ -0.6
NR1H3-230ENST00000527949 CYP4V2Q6ZWL3 525 aaPredicted RBP11.28□□□□□ -0.6
NR1H3-230ENST00000527949 PARS2Q7L3T8 475 aaKnown RBP11.28□□□□□ -0.6
NR1H3-230ENST00000527949 LSMEM2Q8N112 164 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 LZTR1Q8N653 840 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 ARFGAP1Q8N6T3 406 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 NIPA2Q8N8Q9 360 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 RFFLQ8WZ73 363 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 TSC1Q92574 1164 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 HMCESQ96FZ2 354 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 SLC17A9Q9BYT1 436 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 TM6SF2Q9BZW4 377 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 KLC2Q9H0B6 622 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 PDFQ9HBH1 243 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 CNOT8Q9UFF9 292 aaKnown RBP11.28□□□□□ -0.6
NR1H3-230ENST00000527949 CAPN11Q9UMQ6 739 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 CLCA2Q9UQC9 943 aa11.28□□□□□ -0.6
NR1H3-230ENST00000527949 ARHGAP42A6NI28 874 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 A6NNZ2 444 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 GOLGA6L19H0YKK7 550 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 RNF103O00237 685 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 EEF2KO00418 725 aaKnown RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 SLC31A1O15431 190 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 TLX3O43711 291 aaPredicted RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 CREB3O43889 395 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 PRPSAP2O60256 369 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 PRAMEF11O60813 436 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 LRCH4O75427 683 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 PCDH8O95206 1070 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 SERPING1P05155 500 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 THEGLP0DJG4 465 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 CKMT2P17540 419 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 MIPP30301 263 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 HNRNPH3P31942 346 aaKnown RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 DNA2P51530 1060 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 IL9RQ01113 521 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 TLE3Q04726 772 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 PIGHQ14442 188 aaPredicted RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 RFTN1Q14699 578 aaPredicted RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 TBC1D25Q3MII6 688 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 BOLA3Q53S33 107 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 TAF1BQ53T94 588 aaPredicted RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 GDPD4Q6W3E5 623 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 GCNT7Q6ZNI0 430 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 LUZP1Q86V48 1076 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 ZNF248Q8NDW4 579 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 SPOCK2Q92563 424 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 ZNF653Q96CK0 615 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 ZNF641Q96N77 438 aaPredicted RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 TUBGCP5Q96RT8 1024 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 SNRNP25Q9BV90 132 aaKnown RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 ZDHHC6Q9H6R6 413 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 LHX3Q9UBR4 397 aa11.27□□□□□ -0.61
NR1H3-230ENST00000527949 UBA2Q9UBT2 640 aaPredicted RBP11.27□□□□□ -0.61
NR1H3-230ENST00000527949 CFAP69A5D8W1 941 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 TMCO5BA8MYB1 307 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 KRIT1O00522 736 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 TPM3P06753 285 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 ABL2P42684 1182 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 RABIFP47224 123 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 PCBP4P57723 403 aaKnown RBP11.26□□□□□ -0.61
NR1H3-230ENST00000527949 TMPRSS3P57727 454 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 RHOAP61586 193 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 CXADRP78310 365 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 NSUN2Q08J23 767 aaKnown RBP eCLIP11.26□□□□□ -0.61
NR1H3-230ENST00000527949 ZNF211Q13398 564 aaPredicted RBP11.26□□□□□ -0.61
NR1H3-230ENST00000527949 DPYSQ14117 519 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 FGL2Q14314 439 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 AGERQ15109 404 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 DPYSL2Q16555 572 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 HS1BP3Q53T59 392 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 SEL1L3Q68CR1 1132 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 BRAT1Q6PJG6 821 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 RFX8Q6ZV50 586 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 DNAAF5Q86Y56 855 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 GATAD2AQ86YP4 633 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 EID2Q8N6I1 236 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 TEKT4Q8WW24 435 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 BMFQ96LC9 184 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 TBATAQ96M53 351 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 ZNF578Q96N58 590 aaPredicted RBP11.26□□□□□ -0.61
NR1H3-230ENST00000527949 ZNF599Q96NL3 588 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 PEBP4Q96S96 227 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 LGMNQ99538 433 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 KLF6Q99612 283 aaPredicted RBP11.26□□□□□ -0.61
NR1H3-230ENST00000527949 C1QTNF7Q9BXJ2 289 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 DHX35Q9H5Z1 703 aaKnown RBP11.26□□□□□ -0.61
NR1H3-230ENST00000527949 USP29Q9HBJ7 922 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 LCMT1Q9UIC8 334 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 LUC7L2Q9Y383 392 aaKnown RBP11.26□□□□□ -0.61
NR1H3-230ENST00000527949 ACTL7AQ9Y615 435 aa11.26□□□□□ -0.61
NR1H3-230ENST00000527949 SPTY2D1-AS1A0A0U1RR47 76 aa11.25□□□□□ -0.61
NR1H3-230ENST00000527949 SPINT1O43278 529 aa11.25□□□□□ -0.61
NR1H3-230ENST00000527949 ATMINO43313 823 aaPredicted RBP11.25□□□□□ -0.61
NR1H3-230ENST00000527949 BRINP1O60477 761 aa11.25□□□□□ -0.61
NR1H3-230ENST00000527949 CYP1A2P05177 515 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms