RNA–Protein interactions for RNA: ENST00000517578.1

HMGB1P19-201, Transcript of high mobility group box 1 pseudogene 19, humanhuman

BASIC

Gene HMGB1P19, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P19-201ENST00000517578 H3BNH8 94 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRIM77I1YAP6 450 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 WRBO00258 174 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 LAD1O00515 517 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC22A2O15244 555 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 NCK2O43639 380 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZBTB14O43829 449 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 FAM189A1O60320 539 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 DFNA5O60443 496 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TAF5LO75529 589 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CCNKO75909 580 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SNAPC5O75971 98 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 USP1O94782 785 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CDK14O94921 469 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLITRK3O94933 977 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 APOL3O95236 402 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TRIM16O95361 564 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 LYPLA2O95372 231 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CTDNEP1O95476 244 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 NADKO95544 446 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CRTAMO95727 393 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PTTG1O95997 202 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TP53P04637 393 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ABHD2P08910 425 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 C6orf222P0C671 652 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 DBTP11182 482 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MYL4P12829 197 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ABCB4P21439 1286 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TGM1P22735 817 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GRK2P25098 689 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PON1P27169 355 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CD40LGP29965 261 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 RCVRNP35243 200 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GRK3P35626 688 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MTIF2P46199 727 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GNPDA1P46926 289 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 AQP4P55087 323 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ERVK-21P61565 698 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 EEF1A1P68104 462 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 FLI1Q01543 452 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 EXOSC10Q01780 885 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TNFAIP2Q03169 654 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 EEF1A2Q05639 463 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 KLRC3Q07444 240 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ILF2Q12905 390 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 BNIP2Q12982 314 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CAMK1Q14012 370 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 OASLQ15646 514 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZYXQ15942 572 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF181Q2M3W8 571 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF568Q3ZCX4 644 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZFP69Q49AA0 526 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MCMDC2Q4G0Z9 681 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SFT2D3Q587I9 215 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 FSCBQ5H9T9 825 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 RABGAP1LQ5R372 815 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 HES5Q5TA89 166 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 EEF1A1P5Q5VTE0 462 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 IYDQ6PHW0 289 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ARSKQ6UWY0 536 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 VSTM1Q6UX27 236 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 KIAA0408Q6ZU52 694 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 STXBP4Q6ZWJ1 553 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 RALGPS2Q86X27 583 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 LSRQ86X29 649 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 DNAAF5Q86Y56 855 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TDRPQ86YL5 185 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 C2CD5Q86YS7 1000 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PLCZ1Q86YW0 608 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 RIOX2Q8IUF8 465 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SPPL2CQ8IUH8 684 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 HERC6Q8IVU3 1022 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 BBS7Q8IWZ6 715 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ULK2Q8IYT8 1036 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MICU2Q8IYU8 434 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 IFNL3Q8IZI9 196 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 LRRC47Q8N1G4 583 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PQLC1Q8N2U9 271 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 UBL4BQ8N7F7 174 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 FNDC5Q8NAU1 212 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 C8orf58Q8NAV2 365 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZNF680Q8NEM1 530 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 OR8K3Q8NH51 312 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MGARPQ8TDB4 240 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SYTL5Q8TDW5 730 aaPredicted RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 SLC26A7Q8TE54 656 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GRK7Q8WTQ7 553 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 ZUFSPQ96AP4 578 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 HDAC11Q96DB2 347 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 DCUN1D1Q96GG9 259 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PAGE5Q96GU1 130 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 TCTN2Q96GX1 697 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 AHCYL2Q96HN2 611 aaKnown RBP4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MS4A14Q96JA4 679 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 MAP6Q96JE9 813 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PHACTR3Q96KR7 559 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 RIPOR3Q96MK2 946 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 GCNAQ96QF7 691 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 CYTH2Q99418 400 aa4.86□□□□□ -1.63
HMGB1P19-201ENST00000517578 PSMB7Q99436 277 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 416.2 ms