RNA–Protein interactions for RNA: ENST00000513438.1

POLR2J3-217, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 3 BASIC

Gene POLR2J3, Length 546 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-217ENST00000513438 PCBP4P57723 403 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 RAD51Q06609 339 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 PTK2BQ14289 1009 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 CLEC16AQ2KHT3 1053 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 ISXQ2M1V0 245 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 CDKAL1Q5VV42 579 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 RBFAQ8N0V3 343 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 HIC2Q96JB3 615 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 GDAP1L1Q96MZ0 367 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 MBNL1Q9NR56 388 aaKnown RBP13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 FANCLQ9NW38 375 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 SPASTQ9UBP0 616 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 PNMA8BQ9ULN7 279 aaPredicted RBP13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 SIK3Q9Y2K2 1263 aa13.56□□□□□ -0.24
POLR2J3-217ENST00000513438 CREB3O43889 395 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 DXOO77932 396 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 IGSF6O95976 241 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 CALB1P05937 261 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 PLA2G2AP14555 144 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 EPHB2P29323 1055 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 IGFALSP35858 605 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 EIF4A3P38919 411 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 GSCP56915 257 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 YBEYP58557 167 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 ERVPABLB-1P60509 514 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 RHOAP61586 193 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 YPEL5P62699 121 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 NR0B2Q15466 257 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 KLHL40Q2TBA0 621 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 TAF1BQ53T94 588 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 INO80DQ53TQ3 878 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 PRRT3Q5FWE3 981 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 PERM1Q5SV97 790 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 FAXCQ5TGI0 409 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 PHF13Q86YI8 300 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 PHACTR4Q8IZ21 702 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 ZNF843Q8N446 348 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 RTL3Q8N8U3 475 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 C3orf20Q8ND61 904 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 CXorf40AQ8TE69 158 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 CASKIN2Q8WXE0 1202 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 PCMTD1Q96MG8 357 aaPredicted RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 CLPBQ9H078 707 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 APOBEC3BQ9UH17 382 aaKnown RBP13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 MFHAS1Q9Y4C4 1052 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 DAAM1Q9Y4D1 1078 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 RP1P56715 2156 aa13.55□□□□□ -0.24
POLR2J3-217ENST00000513438 HELZ2Q9BYK8 2649 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 RASA4BC9J798 803 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 MUSKO15146 869 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 YY2O15391 372 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 INSIG1O15503 277 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 CCP110O43303 1012 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 RASA4O43374 803 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 ANXA6P08133 673 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 COPB1P53618 953 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 CFHR1Q03591 330 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 SYCP1Q15431 976 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 CYTH1Q15438 398 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 TMEM52BQ4KMG9 183 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 C3orf38Q5JPI3 329 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 EFHC2Q5JST6 749 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 BROXQ5VW32 411 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 SLC35F3Q8IY50 421 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 TP53I13Q8NBR0 393 aaPredicted RBP13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 NEK11Q8NG66 645 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 TPCN2Q8NHX9 752 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 GLMNQ92990 594 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 HMCESQ96FZ2 354 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 ATXN7L3BQ96GX2 97 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 EPAS1Q99814 870 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 WRAP53Q9BUR4 548 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 BOCQ9BWV1 1114 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 CPEB1Q9BZB8 566 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 SLC13A1Q9BZW2 595 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 ASCL3Q9NQ33 180 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 LMBRD1Q9NUN5 540 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 SEPT11Q9NVA2 429 aaKnown RBP13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 DKK3Q9UBP4 350 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 FZD10Q9ULW2 581 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 SATB2Q9UPW6 733 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 COQ6Q9Y2Z9 468 aa13.54□□□□□ -0.24
POLR2J3-217ENST00000513438 A0A1W2PNU3 283 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 TCRBV5S1A1TA0A578 114 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 CAPN8A6NHC0 703 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 WASH4PA8MWX3 477 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 LMO7DNF2Z398 122 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 TOR1BO14657 336 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 RIOK3O14730 519 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 CASC3O15234 703 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 LZTS3O60299 673 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 TSHRP16473 764 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 XPAP23025 273 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 RPIAP49247 311 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 ZNF143P52747 638 aaPredicted RBP13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 RPL7AP62424 266 aaKnown RBP13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 PPARDQ03181 441 aa13.53□□□□□ -0.24
POLR2J3-217ENST00000513438 SERINC3Q13530 473 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms