RNA–Protein interactions for RNA: ENST00000508852.5

CCHCR1-227, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 4

Gene CCHCR1, Length 589 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-227ENST00000508852 ERAP2Q6P179 960 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 BRAT1Q6PJG6 821 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 C19orf48Q6RUI8 117 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 FNIP1Q8TF40 1166 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 HNRNPLLQ8WVV9 542 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 SCG3Q8WXD2 468 aaKnown RBP13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 FGF11Q92914 225 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 APOLD1Q96LR9 279 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 TUBGCP5Q96RT8 1024 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 KLF6Q99612 283 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 IL12RB2Q99665 862 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 EDEM3Q9BZQ6 932 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 SLC13A1Q9BZW2 595 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 UCKL1Q9NWZ5 548 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 UBA2Q9UBT2 640 aaPredicted RBP13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 SCINQ9Y6U3 715 aa13.77□□□□□ -0.21
CCHCR1-227ENST00000508852 A0A1W2PQC6 194 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 CFAP69A5D8W1 941 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 K7ESM1 405 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 DAPK3O43293 454 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 GJB6O95452 261 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 MYBL1P10243 752 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 ATP1A3P13637 1013 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 JUNDP17535 347 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 PSMA2P25787 234 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 NFKBIAP25963 317 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 HTR1BP28222 390 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 ABL2P42684 1182 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 CSNK1DP48730 415 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 RPL7AP62424 266 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 POLR2LP62875 67 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 TYRO3Q06418 890 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 NCAPHQ15003 741 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 ACAP1Q15027 740 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 TMEM52BQ4KMG9 183 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 RAB6CQ53S08 254 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 ERMARDQ5T6L9 678 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 IRF2BP2Q7Z5L9 587 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 MARCH9Q86YJ5 346 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 LZTR1Q8N653 840 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 AOPEPQ8N6M6 819 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 ZNF548Q8NEK5 533 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 OR6K2Q8NGY2 324 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 SNIP1Q8TAD8 396 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 CENPTQ96BT3 561 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 HMCESQ96FZ2 354 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 ZNF578Q96N58 590 aaPredicted RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 RAB6CQ9H0N0 254 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 NOL6Q9H6R4 1146 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 MRPL47Q9HD33 250 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 RTN4Q9NQC3 1192 aaKnown RBP13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 NBEAQ8NFP9 2946 aa13.76□□□□□ -0.21
CCHCR1-227ENST00000508852 A0A1W2PQ67 120 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 EIF4E1BA6NMX2 242 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 RNF103O00237 685 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 EEF2KO00418 725 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 RAD51BO15315 384 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 PRPSAP2O60256 369 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 LZTS3O60299 673 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 OPA1O60313 960 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 GIMD1P0DJR0 217 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 SERPINA4P29622 427 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 EIF2S3P41091 472 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 HCAR3P49019 387 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 RENBPP51606 427 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 TPM4P67936 248 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 SEMG2Q02383 582 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 NSUN2Q08J23 767 aaKnown RBP eCLIP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 MAMLD1Q13495 774 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 AGERQ15109 404 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 NR0B2Q15466 257 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 ASIC2Q16515 512 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 ATXN7L2Q5T6C5 722 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 CDCP2Q5VXM1 449 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 PLEKHA7Q6IQ23 1121 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 LVRNQ6Q4G3 990 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 MACC1Q6ZN28 852 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 APTXQ7Z2E3 356 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 PYROXD2Q8N2H3 581 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 FSTL5Q8N475 847 aaPredicted RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 MAPK15Q8TD08 544 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 NAT6Q93015 286 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 SUV39H2Q9H5I1 410 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 LRRC19Q9H756 370 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 ATP13A3Q9H7F0 1226 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 KCTD5Q9NXV2 234 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 AIPL1Q9NZN9 384 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 APOBEC3BQ9UH17 382 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 RALYQ9UKM9 306 aaKnown RBP13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 AP4E1Q9UPM8 1137 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 ACTL7AQ9Y615 435 aa13.75□□□□□ -0.21
CCHCR1-227ENST00000508852 TSPAN11A1L157 253 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 LMO7DNF2Z398 122 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 PRAMEF11O60813 436 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 TCEA3O75764 348 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 ANXA6P08133 673 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 ALPIP09923 528 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 TIMP2P16035 220 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 GKP32189 559 aa13.74□□□□□ -0.21
CCHCR1-227ENST00000508852 PRKCIP41743 596 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms