RNA–Protein interactions for RNA: ENST00000508583.5

NUP54-207, Transcript of nucleoporin 54, humanhuman

TSL 5

Gene NUP54, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-207ENST00000508583 SERPINF2P08697 491 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3HP0C7X1 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 PYGMP11217 842 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 ACSL1P33121 698 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 MPLP40238 635 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 ATP5OP48047 213 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 RPS21P63220 83 aaKnown RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 CNTN1Q12860 1018 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 SLC10A2Q12908 348 aaPredicted RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 NOMO1Q15155 1222 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TEAD4Q15561 434 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 SLC14A2Q15849 920 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 POM121L1PQ3SYA9 428 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 SETMARQ53H47 684 aaPredicted RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 SLC45A4Q5BKX6 768 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 PIP5KL1Q5T9C9 394 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 AGBL4Q5VU57 503 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 KIAA0895LQ68EN5 471 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3GQ6DHY5 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 ALG1LQ6GMV1 187 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3CQ6IPX1 549 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 NCEH1Q6PIU2 408 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 PRPF39Q86UA1 669 aaKnown RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 TRIM69Q86WT6 500 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TP53INP2Q8IXH6 220 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TMEFF1Q8IYR6 380 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 RGL4Q8IZJ4 473 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TBC1D3Q8IZP1 549 aaPredicted RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 SNX19Q92543 992 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 SPOCK2Q92563 424 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 KLHL32Q96NJ5 620 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 QKIQ96PU8 341 aaKnown RBP eCLIP9.24□□□□□ -0.93
NUP54-207ENST00000508583 NAP1L3Q99457 506 aaPredicted RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 LGMNQ99538 433 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 SUV39H2Q9H5I1 410 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 NT5MQ9NPB1 228 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 VPS45Q9NRW7 570 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 SEPT10Q9P0V9 454 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 TRHDEQ9UKU6 1024 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 DNPEPQ9ULA0 475 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 PACSIN2Q9UNF0 486 aaPredicted RBP9.24□□□□□ -0.93
NUP54-207ENST00000508583 DMTF1Q9Y222 760 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 ACTL7AQ9Y615 435 aa9.24□□□□□ -0.93
NUP54-207ENST00000508583 CEP192Q8TEP8 1941 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 SDK1Q7Z5N4 2213 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 TSPAN11A1L157 253 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 BCLAF3A2AJT9 711 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 CFAP69A5D8W1 941 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 UPK3BL1B0FP48 263 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 UPK3BL2E5RIL1 263 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 KCNK1O00180 336 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 KHNYNO15037 678 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 RNGTTO60942 597 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 FSBPO95073 299 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 PCDH8O95206 1070 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 JCHAINP01591 159 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 CD27P26842 260 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 EIF3EP60228 445 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 RPL26P61254 145 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 PRKD1Q15139 912 aaPredicted RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 LPAL2Q16609 132 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 DUOXA1Q1HG43 343 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 TEX44Q53QW1 395 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 ARMC12Q5T9G4 340 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 DCAF12L1Q5VU92 463 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 ITPRIPL1Q6GPH6 555 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 TTC7BQ86TV6 843 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 ZC3H18Q86VM9 953 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 C12orf50Q8NA57 414 aaPredicted RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 NETO2Q8NC67 525 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 FAM174AQ8TBP5 190 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 ACTL9Q8TC94 416 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 CXorf40AQ8TE69 158 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 HTR3CQ8WXA8 447 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 DNASE2BQ8WZ79 361 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 PIGKQ92643 395 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 ARRDC3Q96B67 414 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 FEM1CQ96JP0 617 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 SEMA3CQ99985 751 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 NUSAP1Q9BXS6 441 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 ADGRE3Q9BY15 652 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 HOMER3Q9NSC5 361 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 SERGEFQ9UGK8 458 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 PILRBQ9UKJ0 227 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 RPL26L1Q9UNX3 145 aaKnown RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 ZKSCAN5Q9Y2L8 839 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.23□□□□□ -0.93
NUP54-207ENST00000508583 WDR87Q6ZQQ6 2873 aa9.23□□□□□ -0.93
NUP54-207ENST00000508583 RALGAPA1Q6GYQ0 2036 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 FAM186AA6NE01 2351 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 PIEZO1Q92508 2521 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 A0A1B0GTW7 788 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 A0A1W2PPC4 97 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 GOLGA6CA6NDK9 693 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 GOLGA6BA6NDN3 693 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 HTRA2O43464 458 aaPredicted RBP9.22□□□□□ -0.93
NUP54-207ENST00000508583 LATO43561 262 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 MAGEC1O60732 1142 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 PIGNO95427 931 aa9.22□□□□□ -0.93
NUP54-207ENST00000508583 SYPP08247 313 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms