RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 FAM228BP0C875 321 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 MYBL1P10243 752 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 DGKAP23743 735 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 AKT2P31751 481 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 HNRNPH3P31942 346 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 HCAR3P49019 387 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 UBASH3AP57075 661 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 PFN3P60673 137 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 ZBED6P86452 979 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 SLC25A11Q02978 314 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 FZD2Q14332 565 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 DPYSL2Q16555 572 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 INAVAQ3KP66 663 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 LRRC73Q5JTD7 316 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 FBXL19Q6PCT2 694 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 GDPD4Q6W3E5 623 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 Q6ZSR6 202 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 ZSCAN30Q86W11 494 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 PROSER1Q86XN7 944 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 NIPA2Q8N8Q9 360 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 ARHGEF26Q96DR7 871 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 IFT43Q96FT9 208 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 FEM1CQ96JP0 617 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 EXOC2Q96KP1 924 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 CNDP2Q96KP4 475 aaKnown RBP14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 THAP2Q9H0W7 228 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 ETNK2Q9NVF9 386 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 SCINQ9Y6U3 715 aa14.17□□□□□ -0.14
PDLIM7-211ENST00000504318 DSPP15924 2871 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 SPTY2D1-AS1A0A0U1RR47 76 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 GOLGA8CPA6NN73 597 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 A6NNZ2 444 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 PIGNO95427 931 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 LDOC1O95751 146 aaPredicted RBP14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 CYP1A2P05177 515 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 IGFALSP35858 605 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 CSNK1DP48730 415 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 PAPOLAP51003 745 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 CLDN6P56747 220 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 RHOAP61586 193 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 ACAP1Q15027 740 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 DHRS13Q6UX07 377 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 POLNQ7Z5Q5 900 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 TP53I13Q8NBR0 393 aaPredicted RBP14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 DENND6BQ8NEG7 585 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 FAM174AQ8TBP5 190 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 FAM71BQ8TC56 605 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 ANP32BQ92688 251 aaKnown RBP14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 BTBD6Q96KE9 485 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 UBA2Q9UBT2 640 aaPredicted RBP14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 DKK4Q9UBT3 224 aa14.16□□□□□ -0.14
PDLIM7-211ENST00000504318 ZFYVE26Q68DK2 2539 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 TRAFD1O14545 582 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 IGSF6O95976 241 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 SERPING1P05155 500 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 GM2AP17900 193 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 IL4RP24394 825 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 ACP1P24666 158 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 ARSEP51690 589 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 EIF2B5Q13144 721 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 MAPK8IP2Q13387 824 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 ASTE1Q2TB18 679 aaPredicted RBP14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 TMEM52BQ4KMG9 183 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 GAS2L3Q86XJ1 694 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 CPNE8Q86YQ8 564 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 TSEN2Q8NCE0 465 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 OR4C6Q8NH72 309 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 HCAR2Q8TDS4 363 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 RFFLQ8WZ73 363 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 ECHDC3Q96DC8 303 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 TRIM11Q96F44 468 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 CALN1Q9BXU9 219 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 MBNL1Q9NR56 388 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 IFNKQ9P0W0 207 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 MYO1AQ9UBC5 1043 aa14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 BZW2Q9Y6E2 419 aaKnown RBP14.15□□□□□ -0.14
PDLIM7-211ENST00000504318 SHROOM3Q8TF72 1996 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 FAM208BQ5VWN6 2430 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 FAM149AA5PLN7 773 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 SIGLEC6O43699 453 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 PRPSAP2O60256 369 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 RFPL3O75679 317 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 RNF8O76064 485 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 CSF2P04141 144 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 C1SP09871 688 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 RARAP10276 462 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 NME1P15531 152 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 CR2P20023 1033 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 MMP12P39900 470 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 ZNF135P52742 658 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 ZNF211Q13398 564 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 AGERQ15109 404 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 SMTNL2Q2TAL5 461 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 PTAR1Q7Z6K3 402 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 TTC7BQ86TV6 843 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 DCP2Q8IU60 420 aaKnown RBP14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 GALNT15Q8N3T1 639 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 RYBPQ8N488 228 aaPredicted RBP14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 MDM1Q8TC05 714 aa14.14□□□□□ -0.15
PDLIM7-211ENST00000504318 SPOCK2Q92563 424 aa14.14□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms