RNA–Protein interactions for RNA: ENST00000493627.1

NFIA-213, Transcript of nuclear factor I A, humanhuman

TSL 1 (best)

Gene NFIA, Length 696 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIA-213ENST00000493627 MPOP05164 745 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 ZNF143P52747 638 aaPredicted RBP9.23□□□□□ -0.93
NFIA-213ENST00000493627 THOP1P52888 689 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 YBEYP58557 167 aaPredicted RBP9.23□□□□□ -0.93
NFIA-213ENST00000493627 RHOAP61586 193 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 MYL5Q02045 173 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 TLE3Q04726 772 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 RAD51Q06609 339 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 CCDC173Q0VFZ6 552 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 PTK2BQ14289 1009 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 CDKN3Q16667 212 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 DEFB133Q30KQ1 61 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 PARP15Q460N3 678 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 PPP1R15BQ5SWA1 713 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 SCYL2Q6P3W7 929 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 GUSBP11Q6P575 273 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 CLEC17AQ6ZS10 378 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 EFL1Q7Z2Z2 1120 aaKnown RBP9.23□□□□□ -0.93
NFIA-213ENST00000493627 TTC7BQ86TV6 843 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 SPACA3Q8IXA5 215 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 PHACTR4Q8IZ21 702 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 LMX1AQ8TE12 382 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 CXorf40AQ8TE69 158 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 CENPTQ96BT3 561 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 EXOC2Q96KP1 924 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 LGMNQ99538 433 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 IL12RB2Q99665 862 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 LRRC61Q9BV99 259 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 C1QTNF7Q9BXJ2 289 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 KLC2Q9H0B6 622 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 ABCG4Q9H172 646 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 TCEAL2Q9H3H9 227 aaPredicted RBP9.23□□□□□ -0.93
NFIA-213ENST00000493627 SPASTQ9UBP0 616 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 LIMA1Q9UHB6 759 aaKnown RBP9.23□□□□□ -0.93
NFIA-213ENST00000493627 RAI2Q9Y5P3 530 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 CHD5Q8TDI0 1954 aa9.23□□□□□ -0.93
NFIA-213ENST00000493627 TRPM6Q9BX84 2022 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 PTPRQQ9UMZ3 2332 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 CPED1A4D0V7 1026 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 WASH4PA8MWX3 477 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 TPP1O14773 563 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 INSIG1O15503 277 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 LZTS3O60299 673 aaPredicted RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 MMP20O60882 483 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 DXOO77932 396 aaKnown RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 ITIH2P19823 946 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 TGM2P21980 687 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 LSSP48449 732 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 AIF1P55008 147 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 PCBP4P57723 403 aaKnown RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 TPI1P60174 286 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 RPL7AP62424 266 aaKnown RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 YPEL5P62699 121 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 UBXN1Q04323 297 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 IRF4Q15306 451 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 NR0B2Q15466 257 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 STX1AQ16623 288 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 ISXQ2M1V0 245 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 KLHL40Q2TBA0 621 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 INO80DQ53TQ3 878 aaPredicted RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 PRRT3Q5FWE3 981 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 CRTC1Q6UUV9 634 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 MACC1Q6ZN28 852 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 LSMEM2Q8N112 164 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 TP53I13Q8NBR0 393 aaPredicted RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 ZNF248Q8NDW4 579 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 BTN2A2Q8WVV5 523 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 HIC2Q96JB3 615 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 TBATAQ96M53 351 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 ZNF578Q96N58 590 aaPredicted RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 ERGIC2Q96RQ1 377 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 AGPAT1Q99943 283 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 NCAPGQ9BPX3 1015 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 CNPY3Q9BT09 278 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 WRAP53Q9BUR4 548 aaKnown RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 BOCQ9BWV1 1114 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 CATSPERBQ9H7T0 1116 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 POLR1BQ9H9Y6 1135 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 ANO10Q9NW15 660 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 DKK3Q9UBP4 350 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 LHX3Q9UBR4 397 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 UBA2Q9UBT2 640 aaPredicted RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 SALL4Q9UJQ4 1053 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 PNMA8BQ9ULN7 279 aaPredicted RBP9.22□□□□□ -0.93
NFIA-213ENST00000493627 FZD10Q9ULW2 581 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 MFHAS1Q9Y4C4 1052 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 MYLKQ15746 1914 aa9.22□□□□□ -0.93
NFIA-213ENST00000493627 KALRNO60229 2985 aa9.21□□□□□ -0.93
NFIA-213ENST00000493627 GCN1Q92616 2671 aaKnown RBP9.21□□□□□ -0.93
NFIA-213ENST00000493627 TSPAN11A1L157 253 aa9.21□□□□□ -0.94
NFIA-213ENST00000493627 EME2A4GXA9 379 aaPredicted RBP9.21□□□□□ -0.94
NFIA-213ENST00000493627 LMO7DNF2Z398 122 aa9.21□□□□□ -0.94
NFIA-213ENST00000493627 FGF10O15520 208 aaPredicted RBP9.21□□□□□ -0.94
NFIA-213ENST00000493627 GCATO75600 419 aa9.21□□□□□ -0.94
NFIA-213ENST00000493627 PIGNO95427 931 aa9.21□□□□□ -0.94
NFIA-213ENST00000493627 TIMP2P16035 220 aa9.21□□□□□ -0.94
NFIA-213ENST00000493627 FERP16591 822 aa9.21□□□□□ -0.94
NFIA-213ENST00000493627 DESP17661 470 aa9.21□□□□□ -0.94
NFIA-213ENST00000493627 XPAP23025 273 aaPredicted RBP9.21□□□□□ -0.94
NFIA-213ENST00000493627 SUOXP51687 545 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms