RNA–Protein interactions for RNA: ENST00000493467.5

TSC1-207, Transcript of TSC complex subunit 1, humanhuman

TSL 1 (best)

Gene TSC1, Length 2,219 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSC1-207ENST00000493467 ARNT2Q9HBZ2 717 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 MRM3Q9HC36 420 aaKnown RBP9.82□□□□□ -0.84
TSC1-207ENST00000493467 CRTAC1Q9NQ79 661 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 NDUFA13Q9P0J0 144 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.82□□□□□ -0.84
TSC1-207ENST00000493467 TLK1Q9UKI8 766 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 RAB26Q9ULW5 256 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 CDYLQ9Y232 598 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 IPPQ9Y573 584 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 PTCH2Q9Y6C5 1203 aa9.82□□□□□ -0.84
TSC1-207ENST00000493467 GOLGA8QA0A0J9YX86 632 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 GOLGA8OA6NCC3 632 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 YJEFN3A6XGL0 299 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 GOLGA8NF8WBI6 632 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 NPHS1O60500 1241 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 DDHD2O94830 711 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 AMHP03971 560 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 SRGAP2BP0DMP2 458 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 GSTT1P30711 240 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 POLE2P56282 527 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 MAP3K7CLP57077 242 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 PSMA6P60900 246 aaKnown RBP9.81□□□□□ -0.84
TSC1-207ENST00000493467 ITGA7Q13683 1181 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 ADGRE1Q14246 886 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 GRB14Q14449 540 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 MMEL1Q495T6 779 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 KIAA0319Q5VV43 1072 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 ARMC3Q5W041 872 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 WSCD1Q658N2 575 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 PM20D1Q6GTS8 502 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 MAMSTRQ6ZN01 415 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 BHLHA9Q7RTU4 235 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 DSELQ8IZU8 1212 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 LSMEM2Q8N112 164 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 TMEM86AQ8N2M4 240 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 CNTD1Q8N815 330 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 SMG8Q8ND04 991 aaKnown RBP9.81□□□□□ -0.84
TSC1-207ENST00000493467 MAML3Q96JK9 1138 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 PPP1R10Q96QC0 940 aaKnown RBP9.81□□□□□ -0.84
TSC1-207ENST00000493467 SPSB2Q99619 263 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 SMOQ99835 787 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 CHRAC1Q9NRG0 131 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 RIMS3Q9UJD0 308 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 SLC39A10Q9ULF5 831 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 COMMD3-BMI1R4GMX3 469 aa9.81□□□□□ -0.84
TSC1-207ENST00000493467 PTGESO14684 152 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 SCGB1D2O95969 90 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 SERPINB5P36952 375 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 GRIA2P42262 883 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 ABCG1P45844 678 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 FOLH1Q04609 750 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 CYLC2Q14093 348 aaPredicted RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 GRAMD1BQ3KR37 738 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 ARL13AQ5H913 290 aaPredicted RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 PCID2Q5JVF3 399 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 RARS2Q5T160 578 aaKnown RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 EP400NLQ6ZTU2 488 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 CENPLQ8N0S6 344 aaPredicted RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 SCML4Q8N228 414 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 ARRDC4Q8NCT1 418 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 ZMIZ2Q8NF64 920 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 ADCY4Q8NFM4 1077 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 NLGN2Q8NFZ4 835 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 TMEM40Q8WWA1 233 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 IRGQQ8WZA9 623 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 DCUN1D1Q96GG9 259 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 MAELQ96JY0 434 aaKnown RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 PPP1R2P1Q96PQ5 205 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 RSRP1Q9BUV0 290 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 COLEC11Q9BWP8 271 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 Q9H521 79 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 WDR55Q9H6Y2 383 aaPredicted RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 ZBTB26Q9HCK0 441 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 VCX3AQ9NNX9 186 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 MRGBPQ9NV56 204 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 DDIT4Q9NX09 232 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 PLK2Q9NYY3 685 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 CPSF2Q9P2I0 782 aaKnown RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 PFDN2Q9UHV9 154 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 AAR2Q9Y312 384 aaKnown RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 PATJQ8NI35 1801 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 MYLKQ15746 1914 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 C15orf38-AP3S2A0A0A6YYH1 394 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 PRSS51A0A1B0GVH4 220 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 HHLA1C9JL84 531 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 SMIM18P0DKX4 95 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 HSPA1AP0DMV8 641 aaKnown RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 HSPA1BP0DMV9 641 aaKnown RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 YBX3P16989 372 aaKnown RBP eCLIP9.8□□□□□ -0.844e-9■■■□□ 15.8
TSC1-207ENST00000493467 TFEBP19484 476 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 CYP2C18P33260 490 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 LHX1P48742 406 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 THOP1P52888 689 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 USP10Q14694 798 aaKnown RBP9.8□□□□□ -0.84
TSC1-207ENST00000493467 LRRC36Q1X8D7 754 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 C2orf27AQ580R0 203 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 PKN3Q6P5Z2 889 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 DCLRE1AQ6PJP8 1040 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 GPRIN1Q7Z2K8 1008 aa9.8□□□□□ -0.84
TSC1-207ENST00000493467 ARPINQ7Z6K5 226 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms