RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 C2CD4BA6NLJ0 364 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 TPP1O14773 563 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 AREL1O15033 823 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 C1QL1O75973 258 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 GFPT2O94808 682 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 LRIG2O94898 1065 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 POP4O95707 220 aaKnown RBP8.66□□□□□ -1.02
PRKCB-208ENST00000487674 AVPP01185 164 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 PRB1P04280 392 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 UGT2B4P06133 528 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 MYF5P13349 255 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 JUNDP17535 347 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 GKP32189 559 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 THOP1P52888 689 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 UCNP55089 124 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 HDAC4P56524 1084 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 GSCP56915 257 aaPredicted RBP8.66□□□□□ -1.02
PRKCB-208ENST00000487674 TMPRSS3P57727 454 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 CXADRP78310 365 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 FMO1Q01740 532 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 CDKN3Q16667 212 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 ISXQ2M1V0 245 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 C15orf59Q2T9L4 293 aaPredicted RBP8.66□□□□□ -1.02
PRKCB-208ENST00000487674 RAB6CQ53S08 254 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 CT47A1Q5JQC4 288 aaPredicted RBP8.66□□□□□ -1.02
PRKCB-208ENST00000487674 TPRG1LQ5T0D9 272 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 BROXQ5VW32 411 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 IGF2-ASQ6U949 168 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 JOSD2Q8TAC2 188 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 GPT2Q8TD30 523 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 LMX1AQ8TE12 382 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 BTN2A2Q8WVV5 523 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 CASKIN2Q8WXE0 1202 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 CENPIQ92674 756 aaPredicted RBP8.66□□□□□ -1.02
PRKCB-208ENST00000487674 NTAN1Q96AB6 310 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 VOPP1Q96AW1 172 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 GRAMD1AQ96CP6 724 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 TBATAQ96M53 351 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 GDAP1L1Q96MZ0 367 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 IL12RB2Q99665 862 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 C1QTNF7Q9BXJ2 289 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 RAB6CQ9H0N0 254 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 NUP62CLQ9H1M0 184 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 ASCL3Q9NQ33 180 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 THSD1Q9NS62 852 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 SAMSN1Q9NSI8 373 aaKnown RBP8.66□□□□□ -1.02
PRKCB-208ENST00000487674 TAB2Q9NYJ8 693 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 SPASTQ9UBP0 616 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 APOBEC3BQ9UH17 382 aaKnown RBP8.66□□□□□ -1.02
PRKCB-208ENST00000487674 DNAI1Q9UI46 699 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 KLF15Q9UIH9 416 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 GGT7Q9UJ14 662 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 SALL4Q9UJQ4 1053 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 DAAM1Q9Y4D1 1078 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 BPTFQ12830 3046 aa8.66□□□□□ -1.02
PRKCB-208ENST00000487674 LRP4O75096 1905 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 CPED1A4D0V7 1026 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 EME2A4GXA9 379 aaPredicted RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 FAM72CH0Y354 149 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 ERVH48-1M5A8F1 160 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 TOR1BO14657 336 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 KDELR3O43731 214 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 TCEA3O75764 348 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 TMCC1O94876 653 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 IGSF6O95976 241 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 PLEKP08567 350 aaPredicted RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 CHRNB2P17787 502 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 TGM2P21980 687 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 SOX5P35711 763 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 IGFALSP35858 605 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 NSFP46459 744 aaKnown RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 JAM2P57087 298 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 POLR2FP61218 127 aaKnown RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 YPEL5P62699 121 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 EIF2B5Q13144 721 aaKnown RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 PTK2BQ14289 1009 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 NR0B2Q15466 257 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 DEFB133Q30KQ1 61 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 MYLK3Q32MK0 819 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 ATXN7L2Q5T6C5 722 aaPredicted RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 FAM72AQ5TYM5 149 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 FAM72DQ6L9T8 149 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 GUSBP11Q6P575 273 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 GDPD4Q6W3E5 623 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 LEKR1Q6ZMV7 388 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 MACC1Q6ZN28 852 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 RBM44Q6ZP01 1051 aaKnown RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 EFL1Q7Z2Z2 1120 aaKnown RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 VPS36Q86VN1 386 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 FAM72BQ86X60 149 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 PHACTR4Q8IZ21 702 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 RBFAQ8N0V3 343 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 CCDC185Q8N715 623 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 RTL3Q8N8U3 475 aaKnown RBP8.65□□□□□ -1.02
PRKCB-208ENST00000487674 C3orf20Q8ND61 904 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 TPCN2Q8NHX9 752 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 SLC30A5Q8TAD4 765 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 WDR48Q8TAF3 677 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 FAM172AQ8WUF8 416 aa8.65□□□□□ -1.02
PRKCB-208ENST00000487674 KCNE4Q8WWG9 221 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms