RNA–Protein interactions for RNA: ENST00000472045.1

IRF1-208, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 5,153 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-208ENST00000472045 ASB2Q96Q27 587 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 LRIG2O94898 1065 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 RASGRP1O95267 797 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 GJA1P17302 382 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 GTF2E2P29084 291 aaKnown RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 EEF1DP29692 281 aaKnown RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 MTHFRP42898 656 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 AQP5P55064 265 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 TEX44Q53QW1 395 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 PRR23BQ6ZRT6 265 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 ST13P4Q8IZP2 240 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 STX19Q8N4C7 294 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 ZNF398Q8TD17 642 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 COMMD8Q9NX08 183 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 TMCO1Q9UM00 188 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 FCF1Q9Y324 198 aaKnown RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 ARFGEF2Q9Y6D5 1785 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 COL2A1P02458 1487 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 GLYATL1P3A0A0U1RQE8 302 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 YJEFN3A6XGL0 299 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 E7ENQ6 273 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 RGS14O43566 566 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 MFSD11O43934 449 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 CCDC166P0CW27 439 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 IDSP22304 550 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 HNRNPH3P31942 346 aaKnown RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 TM4SF4P48230 202 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 AP1S1P61966 158 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 ILF3Q12906 894 aaKnown RBP eCLIP12.36□□□□□ -0.43
IRF1-208ENST00000472045 CYLC2Q14093 348 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 GRASPQ7Z6J2 395 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 GALNT13Q8IUC8 556 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 CENPLQ8N0S6 344 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 WRAP53Q9BUR4 548 aaKnown RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 EFCAB1Q9HAE3 211 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 PSME2Q9UL46 239 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 RGPD2P0DJD1 1756 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 CD3EAPO15446 510 aaKnown RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 VIPP01282 170 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 TFE3P19532 575 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 HPCAL1P37235 193 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 CPA2P48052 419 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 SPIRE1Q08AE8 756 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 IRF5Q13568 498 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 TAF8Q7Z7C8 310 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 AP2M1Q96CW1 435 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 IGSF21Q96ID5 467 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 NSL1Q96IY1 281 aa12.36□□□□□ -0.43
IRF1-208ENST00000472045 GPN3Q9UHW5 284 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 FAF1Q9UNN5 650 aaPredicted RBP12.36□□□□□ -0.43
IRF1-208ENST00000472045 CDK14O94921 469 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 ATG7O95352 703 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 ADH5P11766 374 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 RGS1Q08116 209 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 PFKFB4Q16877 469 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 PLA2G4EQ3MJ16 856 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 ZCWPW2Q504Y3 356 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 CYP4Z1Q86W10 505 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 LONP2Q86WA8 852 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 AGGF1Q8N302 714 aaeCLIP12.35□□□□□ -0.43
IRF1-208ENST00000472045 HMGB4Q8WW32 186 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 DACH2Q96NX9 599 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 TMBIM4Q9HC24 238 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 INSL5Q9Y5Q6 135 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 ANKRD65E5RJM6 399 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 E9PBE3 544 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 ADAMTS3O15072 1205 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 KLHL41O60662 606 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 NDST3O95803 873 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 FAM163BP0C2L3 166 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 AKT2P31751 481 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 CDK7P50613 346 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 PDE1CQ14123 709 aaPredicted RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 ZCCHC8Q6NZY4 707 aaKnown RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 RTL3Q8N8U3 475 aaKnown RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 SEC16BQ96JE7 1060 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 RPL10LQ96L21 214 aaKnown RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 NDNQ99608 321 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 SEMA4BQ9NPR2 832 aaPredicted RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 ALS2Q96Q42 1657 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 PAPSS1O43252 624 aaPredicted RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 NTSP30990 170 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 NDST2P52849 883 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 SLC35G1Q2M3R5 365 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 TXNDC8Q6A555 127 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 CLEC20AQ6ZU45 233 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 IRF2BP1Q8IU81 584 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 GPR135Q8IZ08 494 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 CCDC185Q8N715 623 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 B4GALNT2Q8NHY0 566 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 BPIFB1Q8TDL5 484 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 STARD8Q92502 1023 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 USP7Q93009 1102 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 HMCESQ96FZ2 354 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 VPS50Q96JG6 964 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 KLQ9UEF7 1012 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 HNRNPRO43390 633 aaKnown RBP12.35□□□□□ -0.43
IRF1-208ENST00000472045 ATG13O75143 517 aa12.35□□□□□ -0.43
IRF1-208ENST00000472045 VNN1O95497 513 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms