RNA–Protein interactions for RNA: ENST00000462658.1

UBE4B-204, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-204ENST00000462658 SGTAO43765 313 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 TACC1O75410 805 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 MOCS3O95396 460 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 POMCP01189 267 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 PAEPP09466 180 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 ABCB4P21439 1286 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 RPL9P32969 192 aaKnown RBP7.68□□□□□ -1.18
UBE4B-204ENST00000462658 CYP2C18P33260 490 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 NDST1P52848 882 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 RAD23BP54727 409 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 NAP1L1P55209 391 aaKnown RBP7.68□□□□□ -1.18
UBE4B-204ENST00000462658 CLRN1P58418 232 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 LILRA4P59901 499 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 INCA1Q0VD86 236 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 SOWAHAQ2M3V2 549 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 ACAD10Q6JQN1 1059 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 TRIM72Q6ZMU5 477 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 SLC35F6Q8N357 371 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 RNF10Q8N5U6 811 aaKnown RBP7.68□□□□□ -1.18
UBE4B-204ENST00000462658 SLC4A11Q8NBS3 891 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 IFI44Q8TCB0 444 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 ZNF606Q8WXB4 792 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 CTNNBL1Q8WYA6 563 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-204ENST00000462658 EXTL1Q92935 676 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 MRGPRX4Q96LA9 322 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 VRK1Q99986 396 aaPredicted RBP7.68□□□□□ -1.18
UBE4B-204ENST00000462658 C1QTNF3Q9BXJ4 246 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 ELOVL4Q9GZR5 314 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 ANLNQ9NQW6 1124 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 GDAP2Q9NXN4 497 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 CFAP20Q9Y6A4 193 aaKnown RBP7.68□□□□□ -1.18
UBE4B-204ENST00000462658 ATP8B3O60423 1300 aa7.68□□□□□ -1.18
UBE4B-204ENST00000462658 CASTOR2A6NHX0 329 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 PODXLO00592 558 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 CYB561D2O14569 222 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 PRRG2O14669 202 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 INPPL1O15357 1258 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 MED7O43513 233 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 BUB1O43683 1085 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 AP1G1O43747 822 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 HUS1O60921 280 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 CXCL10P02778 98 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 CLTBP09497 229 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 FAM163BP0C2L3 166 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 VDRP11473 427 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 UNGP13051 313 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-204ENST00000462658 CD19P15391 556 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 BUD31P41223 144 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-204ENST00000462658 MAN2A2P49641 1150 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 CLCNKBP51801 687 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 GPC5P78333 572 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 GRIK3Q13003 919 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 LRRC26Q2I0M4 334 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 TCTN1Q2MV58 587 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 NOMO2Q5JPE7 1267 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 NAA35Q5VZE5 725 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 ZNF529Q6P280 563 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 DEFB128Q7Z7B8 93 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 UNC93AQ86WB7 457 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 SYT12Q8IV01 421 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 APPL2Q8NEU8 664 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 TRIM58Q8NG06 486 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 OR6B3Q8NGW1 331 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 URGCPQ8TCY9 931 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 TFAP2BQ92481 460 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 MVB12AQ96EY5 273 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 UROC1Q96N76 676 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 ALS2CR12Q96Q35 445 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 TWNKQ96RR1 684 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 NAPGQ99747 312 aaPredicted RBP7.67□□□□□ -1.18
UBE4B-204ENST00000462658 ZSWIM1Q9BR11 485 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 MRPL45Q9BRJ2 306 aaKnown RBP7.67□□□□□ -1.18
UBE4B-204ENST00000462658 THAP2Q9H0W7 228 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 SNX25Q9H3E2 840 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 ELAC1Q9H777 363 aaKnown RBP7.67□□□□□ -1.18
UBE4B-204ENST00000462658 TMEM161AQ9NX61 479 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 HMGXB4Q9UGU5 601 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 TBX21Q9UL17 535 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 KIAA1257Q9ULG3 409 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 TSC22D4Q9Y3Q8 395 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 PCDHB7Q9Y5E2 793 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 CITO14578 2027 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 CDH23Q9H251 3354 aa7.67□□□□□ -1.18
UBE4B-204ENST00000462658 RALGAPA2Q2PPJ7 1873 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 TCRBV7S2A1N4TA0A589 114 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 KRTAP23-1A1A580 65 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 CTAGE9A4FU28 777 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 A8MXQ7 604 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 URI1O94763 535 aaPredicted RBP7.66□□□□□ -1.18
UBE4B-204ENST00000462658 LSM8O95777 96 aaKnown RBP7.66□□□□□ -1.18
UBE4B-204ENST00000462658 LPOP22079 712 aaPredicted RBP7.66□□□□□ -1.18
UBE4B-204ENST00000462658 WARSP23381 471 aaKnown RBP7.66□□□□□ -1.18
UBE4B-204ENST00000462658 PAX3P23760 479 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 ACRV1P26436 265 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 GNL1P36915 607 aaPredicted RBP7.66□□□□□ -1.18
UBE4B-204ENST00000462658 NSFP46459 744 aaKnown RBP7.66□□□□□ -1.18
UBE4B-204ENST00000462658 CTXN1P60606 82 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 NOMO3P69849 1222 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 CNGA2Q16280 664 aa7.66□□□□□ -1.18
UBE4B-204ENST00000462658 UPP1Q16831 310 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms