RNA–Protein interactions for RNA: ENST00000456040.1

R3HDM1-212, Transcript of R3H domain containing 1, humanhuman

TSL 5

Gene R3HDM1, Length 851 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-212ENST00000456040 LIFRP42702 1097 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 BNC1Q01954 994 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 CYP4A11Q02928 519 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 TBL3Q12788 808 aaKnown RBP3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 COASYQ13057 564 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 EFR3AQ14156 821 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 KLHL24Q6TFL4 600 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 PRSS45Q7RTY3 260 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 NR2C2APQ86WQ0 139 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 MB21D2Q8IYB1 491 aaPredicted RBP3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 NEXN-AS1Q8NBZ9 246 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 GDPD5Q8WTR4 605 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 TRIB2Q92519 343 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 CNOT9Q92600 299 aaKnown RBP3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 TRIM63Q969Q1 353 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 OTULINQ96BN8 352 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 EVI5LQ96CN4 794 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 YME1L1Q96TA2 773 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 CD180Q99467 661 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 ARPC5LQ9BPX5 153 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 C1QTNF4Q9BXJ3 329 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 IL25Q9H293 177 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 STN1Q9H668 368 aaKnown RBP3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 PTPRHQ9HD43 1115 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 PLSCR4Q9NRQ2 329 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 ANKRD10Q9NXR5 420 aa3.78□□□□□ -1.8
R3HDM1-212ENST00000456040 A0A0U1RQJ8 604 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 C17orf113A0A1B0GUU1 675 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 DYTNA2CJ06 578 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 VWA3AA6NCI4 1184 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 SH2D7A6NKC9 451 aaPredicted RBP3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 SLC16A5O15375 505 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 TSPAN3O60637 253 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 NBNO60934 754 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 TFPIP10646 304 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 TTKP33981 857 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 PEX5P50542 639 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 POU3F1Q03052 451 aaPredicted RBP3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 RALBP1Q15311 655 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 EDRF1Q3B7T1 1238 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 GRAMD1BQ3KR37 738 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 FBXO47Q5MNV8 452 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.77□□□□□ -1.817e-11■■■■■ 33.9
R3HDM1-212ENST00000456040 MON1AQ86VX9 555 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 SUGP1Q8IWZ8 645 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 CPXM2Q8N436 756 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 NKAPQ8N5F7 415 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 RAB40AQ8WXH6 277 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 PYM1Q9BRP8 204 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 MMTAG2Q9BU76 263 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 DDX31Q9H8H2 851 aaKnown RBP3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 ZNF556Q9HAH1 456 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 ITM2CQ9NQX7 267 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 ALKBH4Q9NXW9 302 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 ICAM5Q9UMF0 924 aa3.77□□□□□ -1.81
R3HDM1-212ENST00000456040 ARHGAP10A1A4S6 786 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 TYW5A2RUC4 315 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 EBAG9O00559 213 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 TIMM23O14925 209 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 KLK10O43240 276 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 CEP104O60308 925 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 LDB3O75112 727 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 VNN2O95498 520 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 CH25HO95992 272 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 CENPBP07199 599 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 ZNF8P17098 575 aaPredicted RBP3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 FMO4P31512 558 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 BLKP51451 505 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 ERVFC1-1P60608 527 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 EEF1A2Q05639 463 aaKnown RBP3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 NAA25Q14CX7 972 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 SFTPA2Q8IWL1 248 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 AADATQ8N5Z0 425 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 STAMQ92783 540 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 IGSF21Q96ID5 467 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 LRFN5Q96NI6 719 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 ISCA1Q9BUE6 129 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 LMAN2LQ9H0V9 348 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 RETREG1Q9H6L5 497 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 OR6C3Q9NZP0 311 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 NDRG3Q9UGV2 375 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 PCDHGB5Q9Y5G0 923 aa3.76□□□□□ -1.81
R3HDM1-212ENST00000456040 TCF20Q9UGU0 1960 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 IGLV5-37A0A075B6J1 123 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 FAM90A7PA6NKC0 464 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 SRRM3A6NNA2 597 aaPredicted RBP3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 KRTAP9-6A8MVA2 160 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 FAM90A22PA8MWA6 464 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 FAM90A12PA8MX19 464 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 FAM90A23PA8MXZ1 464 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 PER2O15055 1255 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 ATP2C2O75185 946 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 SNRNP70P08621 437 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 PTPN2P17706 415 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 PAX3P23760 479 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 HDAC4P56524 1084 aa3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 YWHAZP63104 245 aaKnown RBP3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 GRSF1Q12849 480 aaKnown RBP eCLIP3.75□□□□□ -1.81
R3HDM1-212ENST00000456040 SLC12A1Q13621 1099 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms