RNA–Protein interactions for RNA: ENST00000429411.5

HPS4-205, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 3,492 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-205ENST00000429411 CCDC68Q9H2F9 335 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 ALG9Q9H6U8 611 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 NCKIPSDQ9NZQ3 722 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 EGFL7Q9UHF1 273 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 PRG3Q9Y2Y8 225 aaPredicted RBP8.15□□□□□ -1.11
HPS4-205ENST00000429411 PCDHB12Q9Y5F1 795 aa8.15□□□□□ -1.11
HPS4-205ENST00000429411 WDR90Q96KV7 1748 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 ZNF839A8K0R7 811 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 AP2A1O95782 977 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 MT-ND1P03886 318 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 MPOP05164 745 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 JUNP05412 331 aaKnown RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 MMP3P08254 477 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 IMPDH2P12268 514 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 ARRB2P32121 409 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 PNPLA4P41247 253 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 AFF1P51825 1210 aaKnown RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 CCNG1P51959 295 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 CHN2P52757 468 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 FASTKQ14296 549 aaKnown RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 CLEC20AQ6ZU45 233 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 MAVSQ7Z434 540 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 SAMD14Q8IZD0 417 aaPredicted RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 LRRC52Q8N7C0 313 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 DCBLD1Q8N8Z6 715 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 SLC43A3Q8NBI5 491 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 PPTC7Q8NI37 304 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 APBB2Q92870 758 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 B3GALT6Q96L58 329 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 SORT1Q99523 831 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 TRIM8Q9BZR9 551 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 LZTS1Q9Y250 596 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 LOXHD1Q8IVV2 1947 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 SCN1AP35498 2009 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 NCOR1O75376 2440 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 FAM149AA5PLN7 773 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 C9IYK1 514 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 DPYSL4O14531 572 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 THP07101 528 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 HOXA11P31270 313 aaPredicted RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 CCR1P32246 355 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 CLK1P49759 484 aaKnown RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 CLCNKBP51801 687 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 GJA9P57773 515 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 TAS2R39P59534 338 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 IL1RL1Q01638 556 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 SNX17Q15036 470 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 UGP2Q16851 508 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 SH3D19Q5HYK7 790 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 LIPMQ5VYY2 423 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 SH2D5Q6ZV89 423 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 GPRIN1Q7Z2K8 1008 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 FAM35AQ86V20 835 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 ARHGAP18Q8N392 663 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 PDZD8Q8NEN9 1154 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 OR9I1Q8NGQ6 314 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 CYGBQ8WWM9 190 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 IPCEF1Q8WWN9 437 aaPredicted RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 BHMTQ93088 406 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 CIB1Q99828 191 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 DCUN1D5Q9BTE7 237 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 GIMAP2Q9UG22 337 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 GNEQ9Y223 722 aaKnown RBP8.14□□□□□ -1.11
HPS4-205ENST00000429411 RAP2CQ9Y3L5 183 aa8.14□□□□□ -1.11
HPS4-205ENST00000429411 ARHGEF37A1IGU5 675 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 UBDO15205 165 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 RNASEH2AO75792 299 aaKnown RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 AHSGP02765 367 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 FESP07332 822 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 MLNP12872 115 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 DARSP14868 501 aaKnown RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 PSMC3P17980 439 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 PPARGP37231 505 aaPredicted RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 CDK7P50613 346 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 GSTA3Q16772 222 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 OR52E8Q6IFG1 317 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 TLK2Q86UE8 772 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 ZNF410Q86VK4 478 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 ZNF786Q8N393 782 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 KBTBD7Q8WVZ9 684 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 TUBGCP3Q96CW5 907 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 NR1H4Q96RI1 486 aaPredicted RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 TBL1YQ9BQ87 522 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 TMEM79Q9BSE2 394 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 C16orf70Q9BSU1 422 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 EFHD1Q9BUP0 239 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 IL22Q9GZX6 179 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 SORCS3Q9UPU3 1222 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 OR51F1A6NGY5 319 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 RRN3P2A6NIE6 340 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 DAB1O75553 588 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 RAB27AP51159 221 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 MAP2K5Q13163 448 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 DYNC1I2Q13409 638 aaKnown RBP8.13□□□□□ -1.11
HPS4-205ENST00000429411 GK3PQ14409 553 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 MFSD10Q14728 455 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 MTX3Q5HYI7 312 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 NEPROQ6NW34 567 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 MFN1Q8IWA4 741 aa8.13□□□□□ -1.11
HPS4-205ENST00000429411 RBM12BQ8IXT5 1001 aaKnown RBP8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms