RNA–Protein interactions for RNA: ENST00000427157.1

LINC02541-201, Transcript of long intergenic non-protein coding RNA 2541, humanhuman

TSL 3 BASIC

Gene LINC02541, Length 327 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02541-201ENST00000427157 HNRNPCL2B2RXH8 293 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 GAGE7O76087 117 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 ADAP00813 363 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 SERPINC1P01008 464 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 SERPINB2P05120 415 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 CFC1BP0CG36 223 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 CFC1P0CG37 223 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 GAGE12FP0CL80 117 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 GAGE12GP0CL81 117 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 GAGE12IP0CL82 117 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 SERPINB3P29508 390 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 TTKP33981 857 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 ZNF132P52740 706 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 RBM5P52756 815 aaKnown RBP eCLIP3.52□□□□□ -1.85
LINC02541-201ENST00000427157 ARSFP54793 590 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 BRWD1-AS2P59051 145 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 ICA1Q05084 483 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 GAGE1Q13065 139 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 GAGE4Q13068 117 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 DMP1Q13316 513 aaPredicted RBP3.52□□□□□ -1.85
LINC02541-201ENST00000427157 FBXO43Q4G163 708 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 MARK2Q7KZI7 788 aaKnown RBP3.52□□□□□ -1.85
LINC02541-201ENST00000427157 SFTPA2Q8IWL1 248 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 GHDCQ8N2G8 530 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 LINS1Q8NG48 757 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 CSGALNACT1Q8TDX6 532 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 CRB3Q9BUF7 120 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 TAF1DQ9H5J8 278 aaPredicted RBP3.52□□□□□ -1.85
LINC02541-201ENST00000427157 ANKRD10Q9NXR5 420 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 SMARCAL1Q9NZC9 954 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 ZNF224Q9NZL3 707 aa3.52□□□□□ -1.85
LINC02541-201ENST00000427157 PRC1O43663 620 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 ZG16O60844 167 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 CLDN14O95500 239 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 LINC00271P0C7V0 271 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 GM2AP17900 193 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 TBX4P57082 545 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 PHEXP78562 749 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 ZMIZ2Q8NF64 920 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 GOLGA1Q92805 767 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 CSF3RQ99062 836 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 MMTAG2Q9BU76 263 aaKnown RBP3.51□□□□□ -1.85
LINC02541-201ENST00000427157 NOX4Q9NPH5 578 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 SPATS2LQ9NUQ6 558 aaKnown RBP3.51□□□□□ -1.85
LINC02541-201ENST00000427157 SLC9A2Q9UBY0 812 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 GAB2Q9UQC2 676 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 SNX9Q9Y5X1 595 aa3.51□□□□□ -1.85
LINC02541-201ENST00000427157 FAM172BPA6NC97 362 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 P2RY10O00398 339 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 HSPA12AO43301 675 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 CRYAAP02489 173 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 IFIT2P09913 472 aaKnown RBP3.5□□□□□ -1.85
LINC02541-201ENST00000427157 SETSIPP0DME0 302 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 TFPIP10646 304 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 CST5P28325 142 aaPredicted RBP3.5□□□□□ -1.85
LINC02541-201ENST00000427157 PIGAP37287 484 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 LIFRP42702 1097 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 MCM2P49736 904 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 CHAF1AQ13111 956 aaPredicted RBP3.5□□□□□ -1.85
LINC02541-201ENST00000427157 TNFAIP1Q13829 316 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 NAPEPLDQ6IQ20 393 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 SHFQ7M4L6 423 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 TRMT1LQ7Z2T5 733 aaKnown RBP3.5□□□□□ -1.85
LINC02541-201ENST00000427157 KLHDC8BQ8IXV7 354 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 CACNA2D3Q8IZS8 1091 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 CIARTQ8N365 385 aaPredicted RBP3.5□□□□□ -1.85
LINC02541-201ENST00000427157 OR6Y1Q8NGX8 325 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 LRRC8CQ8TDW0 803 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 TAF15Q92804 592 aaKnown RBP eCLIP3.5□□□□□ -1.85
LINC02541-201ENST00000427157 RNFT2Q96EX2 444 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 C3orf30Q96M34 536 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 LRRC4Q9HBW1 653 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 IFT80Q9P2H3 777 aaPredicted RBP3.5□□□□□ -1.85
LINC02541-201ENST00000427157 SLCO3A1Q9UIG8 710 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 SIX4Q9UIU6 781 aa3.5□□□□□ -1.85
LINC02541-201ENST00000427157 CSTBP04080 98 aaKnown RBP3.49□□□□□ -1.85
LINC02541-201ENST00000427157 KCNA5P22460 613 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 ECT2LQ008S8 904 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 FOXO1Q12778 655 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 ZNF155Q12901 538 aaPredicted RBP3.49□□□□□ -1.85
LINC02541-201ENST00000427157 KRT71Q3SY84 523 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 HSP90AB2PQ58FF8 381 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 CCSAPQ6IQ19 270 aaPredicted RBP3.49□□□□□ -1.85
LINC02541-201ENST00000427157 TOGARAM2Q6ZUX3 1019 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 SPATA22Q8NHS9 363 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 TMEM170AQ8WVE7 144 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 FIG4Q92562 907 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 USP13Q92995 863 aaPredicted RBP3.49□□□□□ -1.85
LINC02541-201ENST00000427157 MASTLQ96GX5 879 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 RBM17Q96I25 401 aaKnown RBP3.49□□□□□ -1.85
LINC02541-201ENST00000427157 NPLQ9BXD5 320 aaPredicted RBP3.49□□□□□ -1.85
LINC02541-201ENST00000427157 C1QTNF5Q9BXJ0 243 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 SCRT2Q9NQ03 307 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 ENTPD7Q9NQZ7 604 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 CYSLTR2Q9NS75 346 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 ZFP57Q9NU63 452 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 SRP68Q9UHB9 627 aaKnown RBP3.49□□□□□ -1.85
LINC02541-201ENST00000427157 CD207Q9UJ71 328 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 VDAC3Q9Y277 283 aa3.49□□□□□ -1.85
LINC02541-201ENST00000427157 CNPY2Q9Y2B0 182 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms