RNA–Protein interactions for RNA: ENST00000415361.6

CTNND1-206, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,832 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-206ENST00000415361 EXO5Q9H790 373 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.53□□□□□ -1.043e-6■■□□□ 12.8
CTNND1-206ENST00000415361 MRPS33Q9Y291 106 aaKnown RBP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 GRM6O15303 877 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 DNTTP04053 509 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 APODP05090 189 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 SEC24CP53992 1094 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 NAA30Q147X3 362 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 TIMM50Q3ZCQ8 353 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 FGD3Q5JSP0 725 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 SLC24A5Q71RS6 500 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 GATAD2AQ86YP4 633 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 PIK3R5Q8WYR1 880 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 PNMA8CA0A1B0GUJ8 204 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 BTNL10A8MVZ5 291 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 CHURC1-FNTBB4DL54 471 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 IFNA16P05015 189 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 GPD2P43304 727 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 MARSP56192 900 aaKnown RBP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 LSM12Q3MHD2 195 aaKnown RBP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 RAP1GAP2Q684P5 730 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 FOXR2Q6PJQ5 311 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 CEP68Q76N32 757 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 HDDC2Q7Z4H3 204 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 ADAMTSL2Q86TH1 951 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 TCAIMQ8N3R3 496 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 ITFG1Q8TB96 612 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 SPPL2BQ8TCT7 592 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 ACMSDQ8TDX5 336 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 OXNAD1Q96HP4 312 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 TPD52L3Q96J77 140 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 Q96MT0 163 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 TLE6Q9H808 572 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 SAR1AQ9NR31 198 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 AASDHPPTQ9NRN7 309 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 NINJ2Q9NZG7 142 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 GABRQQ9UN88 632 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 WDR3Q9UNX4 943 aaKnown RBP eCLIP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 INVSQ9Y283 1065 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 PEX1O43933 1283 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 SLC10A3P09131 477 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 FAM58BPP0C7Q3 252 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 PPIBP23284 216 aaKnown RBP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 ICAM3P32942 547 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 ERFP50548 548 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 SQLEQ14534 574 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 INO80DQ53TQ3 878 aaPredicted RBP8.53□□□□□ -1.04
CTNND1-206ENST00000415361 ANXA8L1Q5VT79 327 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 SDHAF4Q5VUM1 108 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 TRIQKQ629K1 86 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 MZT2AQ6P582 158 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 REEP1Q9H902 201 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 GOLGA2P5Q9HBQ8 144 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 CNGB3Q9NQW8 809 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 GALNT8Q9NY28 637 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 KCNK4Q9NYG8 393 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 LIMD1Q9UGP4 676 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 ZMYM5Q9UJ78 669 aa8.53□□□□□ -1.04
CTNND1-206ENST00000415361 PRKCIP41743 596 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 HNMTP50135 292 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 WDR59Q6PJI9 974 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 FAM180AQ6UWF9 173 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 IKBIPQ70UQ0 350 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 POLNQ7Z5Q5 900 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 PEG10Q86TG7 708 aaKnown RBP8.52□□□□□ -1.04
CTNND1-206ENST00000415361 DEFB107AQ8IZN7 70 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 SELENOMQ8WWX9 145 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 NELL1Q92832 810 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 GINS4Q9BRT9 223 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 TTLL2Q9BWV7 592 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 VPS4AQ9UN37 437 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 PCDHA2Q9Y5H9 948 aa8.52□□□□□ -1.04
CTNND1-206ENST00000415361 PLCH1Q4KWH8 1693 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 OR10H2O60403 315 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 FGF1P05230 155 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 TSPAN19P0C672 248 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 SLC35G4P0C7Q5 338 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 PECAM1P16284 738 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-206ENST00000415361 ME2P23368 584 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 GSTM5P46439 218 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 PPP3CAQ08209 521 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 ZNF621Q6ZSS3 439 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 PHF13Q86YI8 300 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-206ENST00000415361 ZSCAN18Q8TBC5 510 aaPredicted RBP8.52□□□□□ -1.05
CTNND1-206ENST00000415361 ARNTL2Q8WYA1 636 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 CD101Q93033 1021 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 ZFRQ96KR1 1074 aaKnown RBP8.52□□□□□ -1.05
CTNND1-206ENST00000415361 TEPSINQ96N21 525 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 BTBD10Q9BSF8 475 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 SCN11AQ9UI33 1791 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 H3BN98 237 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 CCNB1P14635 433 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 PCSK2P16519 638 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 ADRA1DP25100 572 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 CD86P42081 329 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 GLUD2P49448 558 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 TOMM20Q15388 145 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 FAM183BPQ6ZVS7 135 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 DENND1CQ8IV53 801 aa8.52□□□□□ -1.05
CTNND1-206ENST00000415361 DBF4BQ8NFT6 615 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms