RNA–Protein interactions for RNA: ENST00000398741.5

PRAME-201, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS P2 TSL 5 BASIC

Gene PRAME, Length 2,202 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-201ENST00000398741 MAPRE2Q15555 327 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 TIGD7Q6NT04 549 aaPredicted RBP13.23□□□□□ -0.29
PRAME-201ENST00000398741 KLC3Q6P597 504 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 GK5Q6ZS86 529 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 RNF135Q8IUD6 432 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 GABPB2Q8TAK5 448 aaPredicted RBP13.23□□□□□ -0.29
PRAME-201ENST00000398741 NAT14Q8WUY8 206 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 MAELQ96JY0 434 aaKnown RBP13.23□□□□□ -0.29
PRAME-201ENST00000398741 FAR2Q96K12 515 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 HAPLN3Q96S86 360 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 EML4Q9HC35 981 aaKnown RBP13.23□□□□□ -0.29
PRAME-201ENST00000398741 MRPL40Q9NQ50 206 aaKnown RBP13.23□□□□□ -0.29
PRAME-201ENST00000398741 MIOSQ9NXC5 875 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 NEU3Q9UQ49 428 aa13.23□□□□□ -0.29
PRAME-201ENST00000398741 ZNF236Q9UL36 1845 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 NEMP2A6NFY4 417 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 ARL5CA6NH57 179 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 IRAK2O43187 625 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 PGM3O95394 542 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 CRTAMO95727 393 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 ETS2P15036 469 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 ADRA1AP35348 466 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 CHRNA4P43681 627 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 HSPA13P48723 471 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 STX5Q13190 355 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 PCSK7Q16549 785 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 TIGD5Q53EQ6 642 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 BRMS1LQ5PSV4 323 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 AGAP9Q5VTM2 703 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 BTBD8Q5XKL5 378 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 NEPROQ6NW34 567 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 TAF2Q6P1X5 1199 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 CCDC126Q96EE4 140 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 ZNF419Q96HQ0 510 aaPredicted RBP13.22□□□□□ -0.29
PRAME-201ENST00000398741 CNBD2Q96M20 576 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 NDNQ99608 321 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 PKP2Q99959 881 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 SUDS3Q9H7L9 328 aaPredicted RBP13.22□□□□□ -0.29
PRAME-201ENST00000398741 CYP4F12Q9HCS2 524 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 TREX1Q9NSU2 369 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 TBC1D13Q9NVG8 400 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 ST3GAL5Q9UNP4 418 aa13.22□□□□□ -0.29
PRAME-201ENST00000398741 MRPL42Q9Y6G3 142 aaKnown RBP13.22□□□□□ -0.29
PRAME-201ENST00000398741 KCNU1A8MYU2 1149 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 CLPTM1O96005 669 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 HSPA1AP0DMV8 641 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 HSPA1BP0DMV9 641 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 CCR1P32246 355 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 RPL9P32969 192 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 HTR7P34969 479 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 PSME3P61289 254 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 MRPS6P82932 125 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 PDAP1Q13442 181 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 PAN2Q504Q3 1202 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 CNSTQ6PJW8 725 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 MRGPRX2Q96LB1 330 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 PAAF1Q9BRP4 392 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 UTP6Q9NYH9 597 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 PRSS51A0A1B0GVH4 220 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 GPC4O75487 556 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 TNFAIP8O95379 198 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 IGLV3-25P01717 112 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 ZNF865P0CJ78 1059 aaPredicted RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 SMIM18P0DKX4 95 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 SULT2A1Q06520 285 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 SQLEQ14534 574 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 RBM20Q5T481 1227 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 SPRYD7Q5W111 196 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 KIAA0408Q6ZU52 694 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 LILRA2Q8N149 483 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 SCML4Q8N228 414 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 PELI3Q8N2H9 469 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 GALNT4Q8N4A0 578 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 PCDH20Q8N6Y1 951 aaKnown RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 FAM156AQ8NDB6 213 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 CALML6Q8TD86 181 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 TSPAN17Q96FV3 270 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 FCRL2Q96LA5 508 aaPredicted RBP13.21□□□□□ -0.29
PRAME-201ENST00000398741 KLHL32Q96NJ5 620 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 RTP3Q9BQQ7 232 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 TRPC7Q9HCX4 862 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 ABCC13Q9NSE7 274 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 IGSF5Q9NSI5 407 aa13.21□□□□□ -0.29
PRAME-201ENST00000398741 HEATR9A2RTY3 570 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 ACOT8O14734 319 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 UBDO15205 165 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 MSI1O43347 362 aaKnown RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 IPO13O94829 963 aaKnown RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 MOCS2O96007 188 aaPredicted RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 LTA4HP09960 611 aaKnown RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 HOXC13P31276 330 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 RPL5P46777 297 aaKnown RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 FASTKQ14296 549 aaKnown RBP13.2□□□□□ -0.3
PRAME-201ENST00000398741 PSMD5Q16401 504 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 UPP1Q16831 310 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 TECRLQ5HYJ1 363 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 ZNF280DQ6N043 979 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 RANBP10Q6VN20 620 aa13.2□□□□□ -0.3
PRAME-201ENST00000398741 CUZD1Q86UP6 607 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms