RNA–Protein interactions for RNA: ENST00000374837.7

MAP1LC3A-202, Transcript of microtubule associated protein 1 light chain 3 alpha, humanhuman

TSL 3 BASIC

Gene MAP1LC3A, Length 961 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3A-202ENST00000374837 A0A1W2PPC4 97 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 BCAT2O15382 392 aaPredicted RBP21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 FOXD2O60548 495 aaPredicted RBP21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RNGTTO60942 597 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 FTCDO95954 541 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CFIP05156 583 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SERPINF2P08697 491 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TIMP2P16035 220 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CR2P20023 1033 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ABL2P42684 1182 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RWDD2BP57060 319 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PPIDQ08752 370 aaKnown RBP21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PPP2R5EQ16537 467 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RABEPKQ7Z6M1 372 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TTC7BQ86TV6 843 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TRIM69Q86WT6 500 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CCDC13Q8IYE1 715 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 HCAR2Q8TDS4 363 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ALG3Q92685 438 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ZNF641Q96N77 438 aaPredicted RBP21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CNTNAP3BQ96NU0 1288 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 OLFM3Q96PB7 478 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MGME1Q9BQP7 344 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CNTNAP3Q9BZ76 1288 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NT5MQ9NPB1 228 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 SAE1Q9UBE0 346 aaPredicted RBP21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 EPG5Q9HCE0 2579 aa21.22■□□□□ 0.99
MAP1LC3A-202ENST00000374837 LATO43561 262 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 AP1G1O43747 822 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 GDF9O60383 454 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PCDH8O95206 1070 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MAT2AP31153 395 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 COPS2P61201 443 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 MAXP61244 160 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 AP1S1P61966 158 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 LMNB2Q03252 620 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PDK1Q15118 436 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 AASDHQ4L235 1098 aaPredicted RBP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NEK5Q6P3R8 708 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ZNF662Q6ZS27 426 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PRPF39Q86UA1 669 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ANP32BQ92688 251 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RAB7BQ96AH8 199 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NUDCD1Q96RS6 583 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 HEMGNQ9BXL5 484 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 NUSAP1Q9BXS6 441 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 ATP13A3Q9H7F0 1226 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 CAPN10Q9HC96 672 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 FSCN3Q9NQT6 498 aa21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 RBM22Q9NW64 420 aaKnown RBP eCLIP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 TPX2Q9ULW0 747 aaKnown RBP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 PACSIN2Q9UNF0 486 aaPredicted RBP21.21■□□□□ 0.99
MAP1LC3A-202ENST00000374837 A0A1W2PQU0 124 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TSPAN11A1L157 253 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PYGMP11217 842 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 CCNB1P14635 433 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PECAM1P16284 738 aaPredicted RBP21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ITIH2P19823 946 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TGM2P21980 687 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 MAPK8P45983 427 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NR2C2P49116 596 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 BCL2L1Q07817 233 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 HORMAD1Q86X24 394 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 HERPUD2Q9BSE4 406 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 NOD2Q9HC29 1040 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TM9SF3Q9HD45 589 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SCUBE2Q9NQ36 999 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 LZTFL1Q9NQ48 299 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 DLL3Q9NYJ7 618 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ZFR2Q9UPR6 939 aaKnown RBP21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 DNAH14Q0VDD8 3507 aa21.2■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TPRP12270 2363 aaKnown RBP21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 LNP1A1A4G5 178 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 MIF4GDA9UHW6 222 aaKnown RBP21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PRR5-ARHGAP8B1AHC4 643 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 TRAFD1O14545 582 aaPredicted RBP21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 AREL1O15033 823 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 DDX3YO15523 660 aaKnown RBP21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SPINT1O43278 529 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 JCHAINP01591 159 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 SERPINA4P29622 427 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 AP1B1Q10567 949 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 LRRC73Q5JTD7 316 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 AADACL2Q6P093 401 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 BBS12Q6ZW61 710 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 B4GALNT4Q76KP1 1039 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 BZW1Q7L1Q6 419 aaKnown RBP21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ZSWIM9Q86XI8 627 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 UBL4BQ8N7F7 174 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 KLK6Q92876 244 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 FEM1CQ96JP0 617 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PDLIM2Q96JY6 352 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 BRD8Q9H0E9 1235 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 GGT7Q9UJ14 662 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 ITM2BQ9Y287 266 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 PPP2R2CQ9Y2T4 447 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 GON4LQ3T8J9 2241 aa21.19■□□□□ 0.98
MAP1LC3A-202ENST00000374837 LOC105378220A0A1B0GUY1 285 aaPredicted RBP21.18■□□□□ 0.98
MAP1LC3A-202ENST00000374837 KCNK1O00180 336 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms