RNA–Protein interactions for RNA: ENST00000374747.9

NPLOC4-202, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2 BASIC

Gene NPLOC4, Length 5,538 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-202ENST00000374747 LRRC52Q8N7C0 313 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 POC5Q8NA72 575 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 KBTBD8Q8NFY9 601 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 MOSPD2Q8NHP6 518 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 FBXO30Q8TB52 745 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 C7orf43Q8WVR3 580 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 S100ZQ8WXG8 99 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 REPS1Q96D71 796 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 SPAG4Q9NPE6 437 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 DPP7Q9UHL4 492 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 C3orf18Q9UK00 162 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 AK5Q9Y6K8 562 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 E5RJQ4 531 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 RTN3O95197 1032 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 PTPN1P18031 435 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 ITGB6P18564 788 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 HPCAL1P37235 193 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 CDC42P60953 191 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 PERM1Q5SV97 790 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 IL27RAQ6UWB1 636 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 AADATQ8N5Z0 425 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 HSFY1Q96LI6 401 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 TMEM216Q9P0N5 145 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 NCANO14594 1321 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 SIGLEC16A6NMB1 481 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 IDH3BO43837 385 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 CKMP06732 381 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 ARF4P18085 180 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 RPL9P32969 192 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 PSME3P61289 254 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 BTG3Q14201 252 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 SWT1Q5T5J6 900 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 PALB2Q86YC2 1186 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 ULK2Q8IYT8 1036 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 LNX1Q8TBB1 728 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 FAM81AQ8TBF8 368 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 UPF1Q92900 1129 aaKnown RBP eCLIP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 SERPINB11Q96P15 392 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 STN1Q9H668 368 aaKnown RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 PRDM16Q9HAZ2 1276 aa12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 MTF2Q9Y483 593 aaPredicted RBP12.39□□□□□ -0.43
NPLOC4-202ENST00000374747 SNRPB2P08579 225 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 SRP54P61011 504 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 PARP6Q2NL67 630 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 HERC6Q8IVU3 1022 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 DEFB106AQ8N104 65 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 ZNF671Q8TAW3 534 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 UCMAQ8WVF2 138 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 TMEM159Q96B96 161 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 SERAC1Q96JX3 654 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 FAM210AQ96ND0 272 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 FGFBP2Q9BYJ0 223 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 EPB41L1Q9H4G0 881 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 ABCB10Q9NRK6 738 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 ST3GAL5Q9UNP4 418 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 GIT1Q9Y2X7 761 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 XIRP1Q702N8 1843 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 CCDC182A6NF36 153 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 GJB1P08034 283 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 ZSCAN5DPP0CG00 497 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 NDUFAF6Q330K2 333 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 PMF1Q6P1K2 205 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 MCOLN3Q8TDD5 553 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 QKIQ96PU8 341 aaKnown RBP eCLIP12.38□□□□□ -0.434e-8■■□□□ 11.6
NPLOC4-202ENST00000374747 KIFC1Q9BW19 673 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 HES2Q9Y543 173 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 RGSL1A5PLK6 1076 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 BMP10O95393 424 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 KDELR1P24390 212 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 IDH2P48735 452 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 AAGABQ6PD74 315 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 NANOGNBQ7Z5D8 188 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 SYT12Q8IV01 421 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 EDEM1Q92611 657 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 OSBPL11Q9BXB4 747 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 POPDC2Q9HBU9 364 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 MAN1C1Q9NR34 630 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 OPTCQ9UBM4 332 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 PRKAG3Q9UGI9 489 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 ADAM28Q9UKQ2 775 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 LIN7AO14910 233 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 EDIL3O43854 480 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 B4GALT4O60513 344 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 CYP7B1O75881 506 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 WFS1O76024 890 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 S100A9P06702 114 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 ERVK-10P10266 1014 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 NUMBP49757 651 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 XIAPP98170 497 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 FMO1Q01740 532 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 IKBKEQ14164 716 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 IRF2BP2Q7Z5L9 587 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 PHF13Q86YI8 300 aaPredicted RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 GORASP1Q9BQQ3 440 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 VPS45Q9NRW7 570 aa12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 TNPO3Q9Y5L0 923 aaKnown RBP12.38□□□□□ -0.43
NPLOC4-202ENST00000374747 LRP5O75197 1615 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 TTLL13PA6NNM8 815 aa12.37□□□□□ -0.43
NPLOC4-202ENST00000374747 IFRD1O00458 451 aaPredicted RBP12.37□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms