RNA–Protein interactions for RNA: ENST00000358544.6

VPS13B-203, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13B, Length 14,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-203ENST00000358544 FSCN1Q16658 493 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 EARS2Q5JPH6 523 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PLA2G4FQ68DD2 849 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PHF21BQ96EK2 531 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SYTL2Q9HCH5 934 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 EXD2Q9NVH0 621 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PDE10AQ9Y233 779 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 COL3A1P02461 1466 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 A0A087WZ62 844 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 A0A0A0MRY4 1105 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PRKACAP17612 351 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CSNK2BP67870 215 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 KCTD2Q14681 263 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 LRRC71Q8N4P6 559 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SLC7A14Q8TBB6 771 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SPATA13Q96N96 652 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ALG9Q9H6U8 611 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 WDR55Q9H6Y2 383 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 KRCC1Q9NPI7 259 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 STXBP5LQ9Y2K9 1186 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TBX1O43435 398 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SOAT1P35610 550 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PPP3CCP48454 512 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 PRKCEQ02156 737 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 REP15Q6BDI9 236 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TYW3Q6IPR3 259 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF420Q8TAQ5 688 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 FCGR1BQ92637 280 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 NODALQ96S42 347 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 RIT2Q99578 217 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF341Q9BYN7 854 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ERAP1Q9NZ08 941 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 NR2E1Q9Y466 385 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ZFYVE16Q7Z3T8 1539 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 DENRO43583 198 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MAP3K6O95382 1288 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CLK3P49761 638 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CCNIQ14094 377 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 DCDC5Q6ZRR9 648 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 FBXO39Q8N4B4 442 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 RNF149Q8NC42 400 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ABCB9Q9NP78 766 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 H0Y858 1186 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 FANCGO15287 622 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 MAGEB3O15480 346 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 XRCC1P18887 633 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 NR4A2P43354 598 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF773Q6PK81 442 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 SMG8Q8ND04 991 aaKnown RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 LILRB4Q8NHJ6 448 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 TPD52L3Q96J77 140 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 KATNAL1Q9BW62 490 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 NT5C1AQ9BXI3 368 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 RACGAP1Q9H0H5 632 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 CLN6Q9NWW5 311 aa6.12□□□□□ -1.43
VPS13B-203ENST00000358544 RGS17Q9UGC6 210 aaPredicted RBP6.12□□□□□ -1.43
VPS13B-203ENST00000358544 GNG14A0A1W2PPG7 69 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PPEF1O14829 653 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 MT-ND1P03886 318 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ACO1P21399 889 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ATP13A5Q4VNC0 1218 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 SLC44A2Q8IWA5 706 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 COQ10BQ9H8M1 238 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ANKRA2Q9H9E1 313 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 LRRC4CQ9HCJ2 640 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CATSPERZQ9NTU4 200 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IFT80Q9P2H3 777 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 MTRRQ9UBK8 725 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 RPS6KA6Q9UK32 745 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ZW10O43264 779 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PLOD3O60568 738 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TAS2R40P59535 323 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 BTBD8Q5XKL5 378 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 SLC4A11Q8NBS3 891 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CEP41Q9BYV8 373 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 UCKL1Q9NWZ5 548 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TRIM64A6NGJ6 449 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TRIM64BA6NI03 449 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 HTR2BP41595 481 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 DCDC1P59894 354 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 INTS11Q5TA45 600 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 KCNS3Q9BQ31 491 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 CHCHD6Q9BRQ6 235 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 POLR3BQ9NW08 1133 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 FER1L5A0AVI2 2057 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 LOXHD1Q8IVV2 1947 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ASTN2O75129 1339 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PAPSS1O43252 624 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 STX11O75558 287 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 NOL4O94818 638 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 HOXB8P17481 243 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 OXCT1P55809 520 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 MAD2L1Q13257 205 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 ZNF720Q7Z2F6 126 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IRF2BP2Q7Z5L9 587 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 IZUMO1Q8IYV9 350 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 NKD2Q969F2 451 aaPredicted RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 APOL2Q9BQE5 337 aa6.11□□□□□ -1.43
VPS13B-203ENST00000358544 TDRD1Q9BXT4 1180 aaKnown RBP6.11□□□□□ -1.43
VPS13B-203ENST00000358544 PRKD2Q9BZL6 878 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms