RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 GRM6O15303 877 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 CHRNA1P02708 482 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 FGF1P05230 155 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 CHI3L1P36222 383 aaPredicted RBP13.81□□□□□ -0.2
SMC6-201ENST00000351948 PSMD8P48556 350 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 TRIP4Q15650 581 aaPredicted RBP13.81□□□□□ -0.2
SMC6-201ENST00000351948 PARP15Q460N3 678 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 CRYBG2Q8N1P7 616 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 STK40Q8N2I9 435 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 OR8D1Q8WZ84 308 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 TMEM237Q96Q45 408 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 FAM126AQ9BYI3 521 aaPredicted RBP13.81□□□□□ -0.2
SMC6-201ENST00000351948 NDOR1Q9UHB4 597 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 DNM1LO00429 736 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 ALOX15BO15296 676 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 MGEA5O60502 916 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 RNASEH2AO75792 299 aaKnown RBP13.81□□□□□ -0.2
SMC6-201ENST00000351948 THRAP10827 490 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 DRG2P55039 364 aaKnown RBP13.81□□□□□ -0.2
SMC6-201ENST00000351948 CDH13P55290 713 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 OGDHQ02218 1023 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 SETD3Q86TU7 594 aaPredicted RBP13.81□□□□□ -0.2
SMC6-201ENST00000351948 TEX9Q8N6V9 391 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 FUBP3Q96I24 572 aaKnown RBP eCLIP13.81□□□□□ -0.2
SMC6-201ENST00000351948 CNDP1Q96KN2 507 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 TBATAQ96M53 351 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 ADNPQ9H2P0 1102 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 CLDND1Q9NY35 253 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 STRCQ7RTU9 1775 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 F8W810 466 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 HNRNPCL1O60812 293 aaKnown RBP13.81□□□□□ -0.2
SMC6-201ENST00000351948 PRKCGP05129 697 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 DGKAP23743 735 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 CHRNA4P43681 627 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 TTPAP49638 278 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 POLE2P56282 527 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 SMOQ99835 787 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 OSBPL1AQ9BXW6 950 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 ZFYVE1Q9HBF4 777 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 CRTAC1Q9NQ79 661 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 TBC1D14Q9P2M4 693 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 XPR1Q9UBH6 696 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 PADI4Q9UM07 663 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 DTNAQ9Y4J8 743 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 TRBV23OR9-2A0A075B6M9 112 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 ATP6AP2A0A1C7CYW4 349 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 FCHO1O14526 889 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 NDUFS2O75306 463 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 ATP6AP2O75787 350 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 HNRNPLP14866 589 aaKnown RBP eCLIP13.81□□□□□ -0.21e-6■■□□□ 13.4
SMC6-201ENST00000351948 WNT7BP56706 349 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 OR56A4Q8NGH8 313 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 CYGBQ8WWM9 190 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 C1QTNF7Q9BXJ2 289 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 NMUR1Q9HB89 426 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 SLCO1B3Q9NPD5 702 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 SNX15Q9NRS6 342 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 MIOSQ9NXC5 875 aa13.81□□□□□ -0.2
SMC6-201ENST00000351948 IRAK2O43187 625 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 CBX6O95503 412 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 CATP04040 527 aaKnown RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 F7P08709 466 aaPredicted RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 ACBD5Q5T8D3 534 aaPredicted RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 GRAMD4Q6IC98 578 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 C2orf73Q8N5S3 287 aaPredicted RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 QKIQ96PU8 341 aaKnown RBP eCLIP13.8□□□□□ -0.25e-7■■■■□ 22.3
SMC6-201ENST00000351948 COPS8Q99627 209 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 ADAMTS10Q9H324 1103 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 FGF18O76093 207 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 DNTTP04053 509 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 IQCF3P0C7M6 154 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 HLA-DPA1P20036 260 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 PWP1Q13610 501 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 PACS1Q6VY07 963 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 RNF19BQ6ZMZ0 732 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 RTL3Q8N8U3 475 aaKnown RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 C12orf50Q8NA57 414 aaPredicted RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 SMG8Q8ND04 991 aaKnown RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 STAG3L4Q8TBR4 150 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 CRYGNQ8WXF5 182 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 VPS50Q96JG6 964 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 TSEN34Q9BSV6 310 aaKnown RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 BCO2Q9BYV7 579 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 RHBGQ9H310 441 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 MAN1C1Q9NR34 630 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.8□□□□□ -0.2
SMC6-201ENST00000351948 SLX4Q8IY92 1834 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 FAM237BA0A1B0GVD1 139 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 GPR32O75388 356 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 IRF8Q02556 426 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 EXOC3L1Q86VI1 746 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 NAF1Q96HR8 494 aaKnown RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 PIWIL1Q96J94 861 aaKnown RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 RBBP8Q99708 897 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 DPY30Q9C005 99 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 ITM2BQ9Y287 266 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 MYH3P11055 1940 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 DNAJC25-GNG10A0A024R161 153 aa13.8□□□□□ -0.2
SMC6-201ENST00000351948 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP13.8□□□□□ -0.2
SMC6-201ENST00000351948 EIF2S1P05198 315 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms