RNA–Protein interactions for RNA: ENST00000351677.6

PTPN11-201, Transcript of protein tyrosine phosphatase, non-receptor type 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTPN11, Length 6,101 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN11-201ENST00000351677 TRIM25Q14258 630 aaKnown RBP16.13■□□□□ 0.17
PTPN11-201ENST00000351677 MARK2Q7KZI7 788 aaKnown RBP16.13■□□□□ 0.17
PTPN11-201ENST00000351677 SETD9Q8NE22 299 aa16.13■□□□□ 0.17
PTPN11-201ENST00000351677 MSX2P35548 267 aaPredicted RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 SVOPQ8N4V2 548 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 DERAQ9Y315 318 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 TPRKBQ9Y3C4 175 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 A0A087WXM4 84 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 IGKV6D-41A0A0C4DH26 115 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 TRIM38O00635 465 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 CD3EAPO15446 510 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 PSEN1P49768 467 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 RPL38P63173 70 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 ARMCX4Q5H9R4 360 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 PMF1Q6P1K2 205 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 GCNT7Q6ZNI0 430 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 HEATR4Q86WZ0 1026 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 CAMK1DQ8IU85 385 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 RDH11Q8TC12 318 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 DAPK2Q9UIK4 370 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 PLLPQ9Y342 182 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 ADCY6O43306 1168 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 ADRA1BP35368 520 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 CRATP43155 626 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 PDK3Q15120 406 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 NIFKQ9BYG3 293 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 TMEM51Q9NW97 253 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 AJAP1Q9UKB5 411 aaPredicted RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 TLR5O60602 858 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 PGM3O95394 542 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 SNRPD1P62314 119 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 CDK18Q07002 472 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 SFSWAPQ12872 951 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 MFSD5Q6N075 450 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 PRRG3Q9BZD7 231 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 WDR55Q9H6Y2 383 aaPredicted RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 NOCTQ9UK39 431 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 A0A1W2PQH9 124 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 PSMD5Q16401 504 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 AMIGO2Q86SJ2 522 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 LRRC49Q8IUZ0 686 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 OR4L1Q8NH43 312 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 TFAP2BQ92481 460 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 DHX33Q9H6R0 707 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 THG1LQ9NWX6 298 aaKnown RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 LEF1Q9UJU2 399 aaPredicted RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 MAFBQ9Y5Q3 323 aaPredicted RBP16.12■□□□□ 0.17
PTPN11-201ENST00000351677 NFAT5O94916 1531 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 SIGLEC1Q9BZZ2 1709 aa16.12■□□□□ 0.17
PTPN11-201ENST00000351677 CABYRO75952 493 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 OR4Q2P0C623 313 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 MPSTP25325 297 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 PHKG1Q16816 387 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 CNSTQ6PJW8 725 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 GPRIN3Q6ZVF9 776 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 CYP4Z2PQ8N1L4 340 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 GSTCDQ8NEC7 633 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 RSPH1Q8WYR4 309 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 NPAS2Q99743 824 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 APOBEC3GQ9HC16 384 aaKnown RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 PRKAG3Q9UGI9 489 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 DPP7Q9UHL4 492 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 TRIM24O15164 1050 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 DGKKQ5KSL6 1271 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 LUZP2Q86TE4 346 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 NDEL1Q9GZM8 345 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 REEP1Q9H902 201 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 SIX2Q9NPC8 291 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 MTPAPQ9NVV4 582 aaKnown RBP eCLIP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 GEMIN8Q9NWZ8 242 aaKnown RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 AGO1Q9UL18 857 aaKnown RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 SNX6Q9UNH7 406 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 CATP04040 527 aaKnown RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ANXA6P08133 673 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 MAPK9P45984 424 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 DGCR6Q14129 220 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 MAPKAPK3Q16644 382 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 DUSP28Q4G0W2 176 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ATAD3BQ5T9A4 648 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ZNF438Q7Z4V0 828 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 MAGEB10Q96LZ2 347 aaPredicted RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 CORO1BQ9BR76 489 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ABCG8Q9H221 673 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ST6GALNAC4Q9H4F1 302 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ZNHIT2Q9UHR6 403 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 SLC12A4Q9UP95 1085 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 VWA7Q9Y334 891 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 SMIM35A0A1B0GVV1 85 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 XYLBO75191 536 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 PABPC1P11940 636 aaKnown RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 SEMA5AQ13591 1074 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ADHFE1Q8IWW8 467 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 ZCCHC7Q8N3Z6 543 aaKnown RBP16.11■□□□□ 0.17
PTPN11-201ENST00000351677 SLC4A11Q8NBS3 891 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 DPEP3Q9H4B8 488 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 GLOD4Q9HC38 313 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 KLHL3Q9UH77 587 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 AGPSO00116 658 aa16.11■□□□□ 0.17
PTPN11-201ENST00000351677 C2P06681 752 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms