RNA–Protein interactions for RNA: ENST00000346416.6

CDK5RAP1-202, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK5RAP1, Length 2,122 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-202ENST00000346416 G3V2L1 256 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 KDELR3O43731 214 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 DNAJC6O75061 913 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 HAUS5O94927 633 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RHOCP08134 193 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SERPINF2P08697 491 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 MBL2P11226 248 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CD151P48509 253 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 AQP5P55064 265 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ELF3P78545 371 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ITGA9Q13797 1035 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CTC1Q2NKJ3 1217 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ALG1LQ6GMV1 187 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CHST9Q7L1S5 443 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 C16orf59Q7L2K0 433 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 OTOP2Q7RTS6 562 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SETD3Q86TU7 594 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 FEM1CQ96JP0 617 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PSKH2Q96QS6 385 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 MGME1Q9BQP7 344 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 C1QTNF1Q9BXJ1 281 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TRPC7Q9HCX4 862 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ZNF334Q9HCZ1 680 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CPSF2Q9P2I0 782 aaKnown RBP14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 UBA2Q9UBT2 640 aaPredicted RBP14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SEPT3Q9UH03 358 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ANKRD6Q9Y2G4 727 aa14.24□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SCAMP3O14828 347 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 AURKAO14965 403 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 LDB2O43679 373 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 EPOP01588 193 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 HLA-DPA1P20036 260 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 HNRNPH1P31943 449 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PPM1AP35813 382 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 POLD2P49005 469 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RAB10P61026 200 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SMAD3P84022 425 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SLC12A1Q13621 1099 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ZNF460Q14592 562 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 KIAA0408Q6ZU52 694 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CEP97Q8IW35 865 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PIWIL2Q8TC59 973 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CALML6Q8TD86 181 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ZFRQ96KR1 1074 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TMEM237Q96Q45 408 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CINPQ9BW66 212 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TASP1Q9H6P5 420 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TBC1D30Q9Y2I9 924 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ACOT9Q9Y305 439 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CARNS1A5YM72 827 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CBX4O00257 560 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CCL22O00626 93 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 KIAA0355O15063 1070 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 F11P03951 625 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 FGF1P05230 155 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 STMN1P16949 149 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ARRB2P32121 409 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CA8P35219 290 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 GALNT3Q14435 633 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CNSTQ6PJW8 725 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ATG14Q6ZNE5 492 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ALYREFQ86V81 257 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 HERC6Q8IVU3 1022 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TMEM199Q8N511 208 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 GPATCH11Q8N954 259 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 OR6Y1Q8NGX8 325 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 OR6P1Q8NGX9 317 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 BLOC1S5Q8TDH9 187 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PRR11Q96HE9 360 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ELMO2Q96JJ3 720 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 DDX50Q9BQ39 737 aaKnown RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ACE2Q9BYF1 805 aaPredicted RBP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 WWP1Q9H0M0 922 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 NOD2Q9HC29 1040 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SAR1AQ9NR31 198 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 DNAJC16Q9Y2G8 782 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 KCTD3Q9Y597 815 aa14.23□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SLC7A4O43246 635 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 LILRB3O75022 631 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 KRT16P08779 473 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RGRP47804 291 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ARSDP51689 593 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ABCE1P61221 599 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ZNF789Q5FWF6 425 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 RNF219Q5W0B1 726 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TXNDC8Q6A555 127 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CXorf57Q6NSI4 855 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PTAR1Q7Z6K3 402 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TTC7BQ86TV6 843 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 WDR75Q8IWA0 830 aaKnown RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 CENPLQ8N0S6 344 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 ARL14EPQ8N8R7 260 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 GABPB2Q8TAK5 448 aaPredicted RBP14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 PPP4R1Q8TF05 950 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 KCTD4Q8WVF5 259 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 HDAC10Q969S8 669 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 EXOC2Q96KP1 924 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 TSNARE1Q96NA8 513 aa14.22□□□□□ -0.13
CDK5RAP1-202ENST00000346416 SORT1Q99523 831 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms