RNA–Protein interactions for RNA: ENST00000344586.8

NKX2-3-201, Transcript of NK2 homeobox 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene NKX2-3, Length 2,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-3-201ENST00000344586 SPNS2Q8IVW8 549 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 ARHGAP12Q8IWW6 846 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 CHERPQ8IWX8 916 aaKnown RBP23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 NLGN2Q8NFZ4 835 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 RHOBTB2Q9BYZ6 727 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 PCDHAC1Q9H158 963 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 GLOD4Q9HC38 313 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 TREX1Q9NSU2 369 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 CACNA2D2Q9NY47 1150 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 FIS1Q9Y3D6 152 aa23.34■■□□□ 1.33
NKX2-3-201ENST00000344586 FBP2O00757 339 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 TRIM24O15164 1050 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 ANXA9O76027 345 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 CCNCP24863 283 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 ADRA1AP35348 466 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 CD151P48509 253 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 LRP8Q14114 963 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 TRIM25Q14258 630 aaKnown RBP23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 REP15Q6BDI9 236 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 RWDD4Q6NW29 188 aaKnown RBP23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 CCDC117Q8IWD4 279 aaPredicted RBP23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 MAML3Q96JK9 1138 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 UNC93B1Q9H1C4 597 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 TRPC7Q9HCX4 862 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 SARDHQ9UL12 918 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 TIMM13Q9Y5L4 95 aaPredicted RBP23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 PCNTO95613 3336 aa23.33■■□□□ 1.33
NKX2-3-201ENST00000344586 AURKAO14965 403 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 PENKP01210 267 aaPredicted RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 KCNA5P22460 613 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 C1QTNF8P60827 252 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 SQLEQ14534 574 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 TECRLQ5HYJ1 363 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 PTAR1Q7Z6K3 402 aaPredicted RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 ATPAF2Q8N5M1 289 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 GTF3C2Q8WUA4 911 aaPredicted RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 TOP1MTQ969P6 601 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 EME1Q96AY2 570 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 DNAJC1Q96KC8 554 aaKnown RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 IL12RB2Q99665 862 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 MEAF6Q9HAF1 191 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 MRM3Q9HC36 420 aaKnown RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 PADI4Q9UM07 663 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 AP4S1Q9Y587 144 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 A0A1B0GTW7 788 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 C7orf72A4D263 438 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 CCDC160A6NGH7 325 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 CPB1P15086 417 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 KPNA2P52292 529 aaKnown RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 POTEHQ6S545 545 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 PTCD2Q8WV60 388 aaKnown RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 LENG1Q96BZ8 264 aaPredicted RBP23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 ZNF597Q96LX8 424 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 CYP4F12Q9HCS2 524 aa23.32■■□□□ 1.32
NKX2-3-201ENST00000344586 CHRNA4P43681 627 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 PFKPQ01813 784 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 POU4F1Q01851 419 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 RALGDSQ12967 914 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 CSHL1Q14406 222 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 NRF1Q16656 503 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 PPP1R3AQ16821 1122 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 RBM20Q5T481 1227 aaKnown RBP23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 AMIGO2Q86SJ2 522 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 DRAXINQ8NBI3 349 aaPredicted RBP23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 DDI1Q8WTU0 396 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 SLCO4A1Q96BD0 722 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 FAR2Q96K12 515 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 TRPV6Q9H1D0 765 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 SEMA6AQ9H2E6 1030 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 FBXO5Q9UKT4 447 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 TMCO1Q9UM00 188 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 RNF11Q9Y3C5 154 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 PTCH2Q9Y6C5 1203 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 TLL2Q9Y6L7 1015 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 A8MT66 165 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 H0YJX3 145 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 PSMC3P17980 439 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 HDCP19113 662 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 LHX1P48742 406 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 ADAM17P78536 824 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 RHDQ02161 417 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 STX5Q13190 355 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 FASTKQ14296 549 aaKnown RBP23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 MAPRE2Q15555 327 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 PSMD5Q16401 504 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 BTBD8Q5XKL5 378 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 KIAA0930Q6ICG6 404 aaPredicted RBP23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 BORAQ6PGQ7 559 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 RPS27LQ71UM5 84 aaKnown RBP23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 DPP9Q86TI2 863 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 LRTOMTQ8WZ04 291 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 RNF34Q969K3 372 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 OLFM1Q99784 485 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 TSPYL2Q9H2G4 693 aaPredicted RBP23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 ABHD16BQ9H3Z7 469 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 COQ10BQ9H8M1 238 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 MRPL40Q9NQ50 206 aaKnown RBP23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 CHST12Q9NRB3 414 aa23.31■■□□□ 1.32
NKX2-3-201ENST00000344586 PHF24Q9UPV7 400 aa23.31■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms