RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 TRIB3Q96RU7 358 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 PIH1D1Q9NWS0 290 aaKnown RBP21.73■■□□□ 1.07
TPM1-204ENST00000334895 RAI2Q9Y5P3 530 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 EDDM13A0A1B0GTR0 161 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 LOC285095A0A1B0GVY8 99 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 GOLGA6CA6NDK9 693 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 GOLGA6BA6NDN3 693 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 SMAPO00193 183 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 PSMD3O43242 534 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 SIN3BO75182 1162 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 PIGNO95427 931 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 PRLP01236 227 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 GOLGA6DP0CG33 693 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 WASP42768 502 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 ZXDAP98168 799 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 C2orf27AQ580R0 203 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 FNBP1LQ5T0N5 605 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 DENND5AQ6IQ26 1287 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 ZNF852Q6ZMS4 543 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 CHPFQ8IZ52 775 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 ZCCHC9Q8N567 271 aaKnown RBP21.73■■□□□ 1.07
TPM1-204ENST00000334895 IL17RCQ8NAC3 791 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 OR52K1Q8NGK4 314 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 TBL1YQ9BQ87 522 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 ZDHHC6Q9H6R6 413 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 GOLGA6AQ9NYA3 693 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 NDRG2Q9UN36 371 aaKnown RBP21.73■■□□□ 1.07
TPM1-204ENST00000334895 WASF2Q9Y6W5 498 aa21.73■■□□□ 1.07
TPM1-204ENST00000334895 TRAFD1O14545 582 aaPredicted RBP21.72■■□□□ 1.07
TPM1-204ENST00000334895 AVILO75366 819 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 POP4O95707 220 aaKnown RBP21.72■■□□□ 1.07
TPM1-204ENST00000334895 CTSLP07711 333 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 ATXN1LP0C7T5 689 aaKnown RBP21.72■■□□□ 1.07
TPM1-204ENST00000334895 MAGEA3P43357 314 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 CHRNA4P43681 627 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 MAPK8P45983 427 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 E2F5Q15329 346 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 MSS51Q4VC12 460 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 UBALD2Q8IYN6 164 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 AGGF1Q8N302 714 aaeCLIP21.72■■□□□ 1.07
TPM1-204ENST00000334895 KCNV2Q8TDN2 545 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 FEM1CQ96JP0 617 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 FMO2Q99518 471 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 FSD1LQ9BXM9 530 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 CPEB1Q9BZB8 566 aaKnown RBP21.72■■□□□ 1.07
TPM1-204ENST00000334895 CASS4Q9NQ75 786 aa21.72■■□□□ 1.07
TPM1-204ENST00000334895 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP21.71■■□□□ 1.07
TPM1-204ENST00000334895 NPC1O15118 1278 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 FZD6O60353 706 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 ADAM23O75077 832 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 RNF40O75150 1001 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 EPHX1P07099 455 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 TUBBP07437 444 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 PDHA1P08559 390 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 MCM3P25205 808 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 RECQLP46063 649 aaPredicted RBP21.71■■□□□ 1.07
TPM1-204ENST00000334895 STARD6P59095 220 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 CDK18Q07002 472 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 NAPEPLDQ6IQ20 393 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 LRRC8BQ6P9F7 803 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 STK40Q8N2I9 435 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 HEPHQ9BQS7 1158 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 PRSS16Q9NQE7 514 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 FBXL21Q9UKT6 434 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 CHKBQ9Y259 395 aa21.71■■□□□ 1.07
TPM1-204ENST00000334895 HTRA2O43464 458 aaPredicted RBP21.7■■□□□ 1.06
TPM1-204ENST00000334895 BANF1O75531 89 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 ALADP13716 330 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 TARSP26639 723 aaKnown RBP21.7■■□□□ 1.06
TPM1-204ENST00000334895 SIX5Q8N196 739 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 GRIN3AQ8TCU5 1115 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 AENQ8WTP8 325 aaKnown RBP21.7■■□□□ 1.06
TPM1-204ENST00000334895 ERLEC1Q96DZ1 483 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 TUBGCP5Q96RT8 1024 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 FAM129BQ96TA1 746 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 GABRG3Q99928 467 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 EPHX3Q9H6B9 360 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 ATP13A3Q9H7F0 1226 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 MTF2Q9Y483 593 aaPredicted RBP21.7■■□□□ 1.06
TPM1-204ENST00000334895 MYLKQ15746 1914 aa21.7■■□□□ 1.06
TPM1-204ENST00000334895 EPOP01588 193 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 CHRNB1P11230 501 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 NTSR1P30989 418 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 MRPS21P82921 87 aaKnown RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 BCL2L1Q07817 233 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 GALNT3Q14435 633 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 SLC1A5Q15758 541 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 HIF1AQ16665 826 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 FBXO43Q4G163 708 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 SIRPB2Q5JXA9 342 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 PPP1R21Q6ZMI0 780 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 LINC00523Q86TU6 105 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 ZSWIM9Q86XI8 627 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 SLC25A41Q8N5S1 370 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 EDAQ92838 391 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 WDR83Q9BRX9 315 aaKnown RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 ARNT2Q9HBZ2 717 aa21.69■■□□□ 1.06
TPM1-204ENST00000334895 XAB2Q9HCS7 855 aaKnown RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 MTRF1LQ9UGC7 380 aaKnown RBP21.69■■□□□ 1.06
TPM1-204ENST00000334895 SUN2Q9UH99 717 aa21.69■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms