RNA–Protein interactions for RNA: ENST00000325404.2

SOX2-201, Transcript of SRY-box 2, humanhuman

APPRIS P1 BASIC

Gene SOX2, Length 2,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-201ENST00000325404 CEP97Q8IW35 865 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 CELF6Q96J87 481 aaKnown RBP20.08■□□□□ 0.8
SOX2-201ENST00000325404 CAPNS2Q96L46 248 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 MAGED2Q9UNF1 606 aaPredicted RBP20.08■□□□□ 0.8
SOX2-201ENST00000325404 TRPV2Q9Y5S1 764 aa20.08■□□□□ 0.8
SOX2-201ENST00000325404 TRIM38O00635 465 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 TXNDC9O14530 226 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 PRKAR2AP13861 404 aaKnown RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 RPL5P46777 297 aaKnown RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 GALNT1Q10472 559 aaPredicted RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 NXNQ6DKJ4 435 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 EP400NLQ6ZTU2 488 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 MFSD6LQ8IWD5 586 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 REM2Q8IYK8 340 aaPredicted RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 AFAP1L2Q8N4X5 818 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 EDEM1Q92611 657 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 ZFP42Q96MM3 310 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 SARDHQ9UL12 918 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 SMIM18P0DKX4 95 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 SAT1P21673 171 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 MS4A2Q01362 244 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 CAP1Q01518 475 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 USP41Q3LFD5 358 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 SPATA22Q8NHS9 363 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 GABPB2Q8TAK5 448 aaPredicted RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 DQX1Q8TE96 717 aaKnown RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 DGCR14Q96DF8 476 aaKnown RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 ZFRQ96KR1 1074 aaKnown RBP20.07■□□□□ 0.8
SOX2-201ENST00000325404 CATSPERBQ9H7T0 1116 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 ZNF696Q9H7X3 374 aa20.07■□□□□ 0.8
SOX2-201ENST00000325404 MAFKO60675 156 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 THP07101 528 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 CCND3P30281 292 aaPredicted RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 AVPR1AP37288 418 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 MRPS22P82650 360 aaKnown RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 MPP1Q00013 466 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 STX5Q13190 355 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 DEFB115Q30KQ5 88 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 TMEM198Q66K66 360 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 TIGD7Q6NT04 549 aaPredicted RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 ESRP1Q6NXG1 681 aaKnown RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 GALNT7Q86SF2 657 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 DENND6AQ8IWF6 608 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 BHLHE22Q8NFJ8 381 aaPredicted RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 MRPL1Q9BYD6 325 aaKnown RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 EML4Q9HC35 981 aaKnown RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 RNF186Q9NXI6 227 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 FNIP2Q9P278 1114 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 EPS15L1Q9UBC2 864 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 SUCOQ9UBS9 1254 aaKnown RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 CRTAMO95727 393 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 ENO3P13929 434 aaPredicted RBP20.06■□□□□ 0.8
SOX2-201ENST00000325404 ELNP15502 786 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 CTBP1Q13363 440 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 MANEALQ5VSG8 457 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 FAM171BQ6P995 826 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 RANBP10Q6VN20 620 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 TRIM67Q6ZTA4 783 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 SERINC5Q86VE9 423 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 RNF34Q969K3 372 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 ASB9Q96DX5 294 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 MOCOSQ96EN8 888 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 DTNBP1Q96EV8 351 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 FICDQ9BVA6 458 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 PADI4Q9UM07 663 aa20.06■□□□□ 0.8
SOX2-201ENST00000325404 CASP8AP2Q9UKL3 1982 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 TNFAIP8O95379 198 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 JUNP05412 331 aaKnown RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 ASGR1P07306 291 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 IGFBP6P24592 240 aaPredicted RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 PMLP29590 882 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 DPP6P42658 865 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 SLC1A2P43004 574 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 RABGGTBP53611 331 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 TAS2R39P59534 338 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 ILF2Q12905 390 aaKnown RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 POU6F1Q14863 301 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 SLC14A2Q15849 920 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 AFMIDQ63HM1 303 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 CCNYL1Q8N7R7 359 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 TXNDC5Q8NBS9 432 aaKnown RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 IPMKQ8NFU5 416 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 CALML6Q8TD86 181 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 PRICKLE1Q96MT3 831 aaPredicted RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 ACBD6Q9BR61 282 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 MRPS26Q9BYN8 205 aaKnown RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 MEAF6Q9HAF1 191 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 ARNT2Q9HBZ2 717 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 FBXO5Q9UKT4 447 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 DFFAO00273 331 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 RPLP2P05387 115 aaKnown RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 PFKPQ01813 784 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 TRAP1Q12931 704 aaKnown RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 SQLEQ14534 574 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 PDCD2Q16342 344 aaPredicted RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 FAM83EQ2M2I3 478 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 USP33Q8TEY7 942 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 HEXDCQ8WVB3 486 aa20.05■□□□□ 0.8
SOX2-201ENST00000325404 DUS3LQ96G46 650 aaKnown RBP20.05■□□□□ 0.8
SOX2-201ENST00000325404 ELMO2Q96JJ3 720 aa20.05■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms