RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 ZNF776Q68DI1 518 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 TAF8Q7Z7C8 310 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 DEFB123Q8N688 67 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 ALLCQ8N6M5 410 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 PLD5Q8N7P1 536 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 RSRC1Q96IZ7 334 aaKnown RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 BTBD1Q9H0C5 482 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 XYLT2Q9H1B5 865 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 FAM83DQ9H4H8 585 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 EDDM13A0A1B0GTR0 161 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 C5orf58C9J3I9 102 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 SLC2A4P14672 509 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 CRADDP78560 199 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 DSC2Q02487 901 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 BMPR2Q13873 1038 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 NAA30Q147X3 362 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 NOMO1Q15155 1222 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 TMEM240Q5SV17 173 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 TCEAL8Q8IYN2 117 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 ZNF655Q8N720 491 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 LRRC15Q8TF66 581 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 FAM126AQ9BYI3 521 aaPredicted RBP9.34□□□□□ -0.91
PTPRE-202ENST00000306042 PIGVQ9NUD9 493 aa9.34□□□□□ -0.91
PTPRE-202ENST00000306042 TIAM2Q8IVF5 1701 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ANGPT2O15123 496 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ZWINTO95229 277 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ITGB1P05556 798 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 MC4RP32245 332 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 PTPRNQ16849 979 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 TCEAL5Q5H9L2 206 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ATXN7L2Q5T6C5 722 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 GALNT13Q8IUC8 556 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 RBFAQ8N0V3 343 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF398Q8TD17 642 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 HES6Q96HZ4 224 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 MARCOQ9UEW3 520 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 WNK3Q9BYP7 1800 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 GLYATL1P3A0A0U1RQE8 302 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 SPECC1L-ADORA2AF8WAN1 911 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 M0QZQ0 153 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 IDSP22304 550 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 RPL21P46778 160 aaKnown RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 BLKP51451 505 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 CCNG1P51959 295 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 TP53BP2Q13625 1128 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 RFTN1Q14699 578 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF366Q8N895 744 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 UNKQ9C0B0 810 aaKnown RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 TXLNGQ9NUQ3 528 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 AHSPQ9NZD4 102 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 NIPSNAP3AQ9UFN0 247 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 CDH7Q9ULB5 785 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ASF1AQ9Y294 204 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 AKAP11Q9UKA4 1901 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 FSCN2O14926 492 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 SSTR1P30872 391 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 MLLT6P55198 1093 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 NTHL1P78549 312 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 HPCAP84074 193 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 LVRNQ6Q4G3 990 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF852Q6ZMS4 543 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 HDAC10Q969S8 669 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ARL8AQ96BM9 186 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 OSBPL2Q9H1P3 480 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 SLC25A51Q9H1U9 297 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 C8orf33Q9H7E9 229 aaPredicted RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 IMP3Q9NV31 184 aaKnown RBP9.33□□□□□ -0.92
PTPRE-202ENST00000306042 SLC24A2Q9UI40 661 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 GSAPA4D1B5 854 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 RCCD1A6NED2 376 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 TXNDC9O14530 226 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 TM7SF2O76062 418 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 CYP11A1P05108 521 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 SOAT1P35610 550 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 LRRC8EQ6NSJ5 796 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 TPRG1Q6ZUI0 275 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 FBXO39Q8N4B4 442 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 OR4L1Q8NH43 312 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 KLK6Q92876 244 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 FAM111AQ96PZ2 611 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 TRIM15Q9C019 465 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 SPHK2Q9NRA0 654 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 FBXL12Q9NXK8 326 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 ORC6Q9Y5N6 252 aa9.33□□□□□ -0.92
PTPRE-202ENST00000306042 PHIPQ8WWQ0 1821 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 A0A088AWK7 358 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 GNG14A0A1W2PPG7 69 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 LINC01553A4QN01 128 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF840PA6NDX5 716 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ISM1B1AKI9 464 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 VIPP01282 170 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 KRT6AP02538 564 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 KRT6BP04259 564 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 MPOP05164 745 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 TNNI3P19429 210 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 ZNF10P21506 573 aaPredicted RBP9.32□□□□□ -0.92
PTPRE-202ENST00000306042 HSD17B3P37058 310 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 VIPR2P41587 438 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 KRT6CP48668 564 aa9.32□□□□□ -0.92
PTPRE-202ENST00000306042 RPIAP49247 311 aa9.32□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms