RNA–Protein interactions for RNA: ENST00000284049.7

CHD1-201, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHD1, Length 6,457 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-201ENST00000284049 SMC6Q96SB8 1091 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 MPHOSPH9Q99550 1183 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TXN2Q99757 166 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 NUDT22Q9BRQ3 303 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 NAA11Q9BSU3 229 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 MECRQ9BV79 373 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 OR10A2Q9H208 303 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RANGRFQ9HD47 186 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 TBC1D14Q9P2M4 693 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 GMPR2Q9P2T1 348 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 KCNK7Q9Y2U2 307 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 AATKQ6ZMQ8 1374 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 KINO60870 393 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 TACC1O75410 805 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RHOBTB1O94844 696 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 USP8P40818 1118 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 KIR2DL1P43626 348 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 KIR2DL2P43627 348 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 NPY4RP50391 375 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 LIMK1P53667 647 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RBM6P78332 1123 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 ATG9BQ674R7 924 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 WDR73Q6P4I2 378 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 BLOC1S2Q6QNY1 142 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TADA2BQ86TJ2 420 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CEP57Q86XR8 500 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 GSPT2Q8IYD1 628 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 FITM2Q8N6M3 262 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 KAT2BQ92831 832 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 FER1L6-AS2Q96M78 137 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CAPS2Q9BXY5 557 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 MAGEE1Q9HCI5 957 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 PCDH18Q9HCL0 1135 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 MID1IP1Q9NPA3 183 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 PIH1D3Q9NQM4 214 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 CHRAC1Q9NRG0 131 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RBPJLQ9UBG7 517 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 NKX1-2Q9UD57 310 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 FBXO4Q9UKT5 387 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CAB39Q9Y376 341 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 PIK3C2AO00443 1686 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RREB1Q92766 1687 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 LRRC37A3O60309 1634 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 EME2A4GXA9 379 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 CDHR4A6H8M9 788 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 GRXCR1A8MXD5 290 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SSX5O60225 188 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 MLYCDO95822 493 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 ESR1P03372 595 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SERPING1P05155 500 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 ENO1P06733 434 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 TYMPP19971 482 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CD72P21854 359 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SREBF1P36956 1147 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CRKLP46109 303 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 ASMTP46597 345 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CCR5P51681 352 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 NIPAL4Q0D2K0 466 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RRS1Q15050 365 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 ARHGEF6Q15052 776 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 ZMAT1Q5H9K5 638 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 FCRL6Q6DN72 434 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 KIF6Q6ZMV9 814 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 HAUS6Q7Z4H7 955 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 FAM124AQ86V42 546 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 PTGR2Q8N8N7 351 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 OR1N1Q8NGS0 311 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TMEM125Q96AQ2 219 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 WDR11Q9BZH6 1224 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SMURF2Q9HAU4 748 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SLC35D1Q9NTN3 355 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 ARL8BQ9NVJ2 186 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 RAI14Q9P0K7 980 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 ANKMY1Q9P2S6 941 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SLC5A6Q9Y289 635 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SSX2IPQ9Y2D8 614 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 OVOS2A0A0G2JMS6 1433 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SBNO1A3KN83 1393 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CNTNAP4Q9C0A0 1308 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CCP110O43303 1012 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SLC25A17O43808 307 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 OR6A2O95222 327 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CYP2A6P11509 494 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 UQCRC1P31930 480 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CIITAP33076 1130 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 HSD17B4P51659 736 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 IL13RA1P78552 427 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 HTRA4P83105 476 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 HHEXQ03014 270 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 LMAN2Q12907 356 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 BMPR2Q13873 1038 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 PFKFB3Q16875 520 aaPredicted RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 KLHL26Q53HC5 615 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TTC22Q5TAA0 569 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 SERTAD4-AS1Q5TG53 156 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 MARK2Q7KZI7 788 aaKnown RBP2.81□□□□□ -1.96
CHD1-201ENST00000284049 TDRPQ86YL5 185 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 GIMAP1Q8WWP7 306 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 CFAP57Q96MR6 1250 aa2.81□□□□□ -1.96
CHD1-201ENST00000284049 TRIB1Q96RU8 372 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms