RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 KLRG2A4D1S0 409 aaPredicted RBP11.65□□□□□ -0.55
VPS33A-201ENST00000267199 C2orf81A6NN90 581 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 TK2O00142 265 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 RAD51BO15315 384 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 ITGB6P18564 788 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 EPHX2P34913 555 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 GRM5P41594 1212 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 SQLEQ14534 574 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 DLG2Q15700 870 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 GATA5Q9BWX5 397 aaPredicted RBP11.65□□□□□ -0.55
VPS33A-201ENST00000267199 OSBPL6Q9BZF3 934 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 PCDHAC1Q9H158 963 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 GOLGA2P5Q9HBQ8 144 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 VPS45Q9NRW7 570 aa11.65□□□□□ -0.55
VPS33A-201ENST00000267199 KLHL33A6NCF5 533 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 C2CD4BA6NLJ0 364 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PDZK1P1A8MUH7 402 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TMEM114B3SHH9 223 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 C5orf58C9J3I9 102 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF197O14709 1029 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ITM2AO43736 263 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 NRP2O60462 931 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 CNOT3O75175 753 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 SERPINI2O75830 405 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 CELF2O95319 508 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 LBPP18428 481 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 KLRC2P26717 231 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 AXLP30530 894 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ICAM3P32942 547 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 BEX3Q00994 111 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 OGDHQ02218 1023 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ITGA7Q13683 1181 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 C9orf131Q5VYM1 1079 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 MILR1Q7Z6M3 343 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 UNC5BQ8IZJ1 945 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 LRRC52Q8N7C0 313 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PTGR2Q8N8N7 351 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PRR11Q96HE9 360 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 SYTL2Q9HCH5 934 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TPRKBQ9Y3C4 175 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 AKAP11Q9UKA4 1901 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 CXorf49A8MYA2 514 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 STX16-NPEPL1H3BU86 382 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TPD52L2O43399 206 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 CABYRO75952 493 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PPP3CCP48454 512 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 LSM12Q3MHD2 195 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PAGE2BQ5JRK9 111 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TREML1Q86YW5 311 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 LZTR1Q8N653 840 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ENDOVQ8N8Q3 282 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 OR52K2Q8NGK3 314 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PCDH19Q8TAB3 1148 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 EMID1Q96A84 441 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PGLYRP2Q96PD5 576 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ADAM28Q9UKQ2 775 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TRIM17Q9Y577 477 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 RAD54BQ9Y620 910 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 BCLAF3A2AJT9 711 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 F5H5T6 163 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 MSCO60682 206 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 XRCC1P18887 633 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 DNAJB2P25686 324 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 SOAT1P35610 550 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 SEPHS1P49903 392 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 MRPS5P82675 430 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 KRR1Q13601 381 aaKnown RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 CEP78Q5JTW2 689 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PCID2Q5JVF3 399 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TTC30AQ86WT1 665 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 DPY30Q9C005 99 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 EPB41L1Q9H4G0 881 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 AAASQ9NRG9 546 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ZMYM5Q9UJ78 669 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 SNX8Q9Y5X2 465 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 MFSD11O43934 449 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 SNAP91O60641 907 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ZNF37AP17032 561 aaPredicted RBP11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PSEN2P49810 448 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ENPEPQ07075 957 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 INAQ16352 499 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PPM1LQ5SGD2 360 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PRAMEF19Q5SWL8 479 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TTC23Q5W5X9 447 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 CHADLQ6NUI6 762 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ARMCX6Q7L4S7 300 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ANKRD23Q86SG2 305 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 TMEM192Q8IY95 271 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 NAT8LQ8N9F0 302 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 ZFAND2BQ8WV99 257 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 DCAKDQ8WVC6 231 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 PHF21AQ96BD5 680 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 UBAP1Q9NZ09 502 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 HMGXB4Q9UGU5 601 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 U3KQV3 271 aa11.64□□□□□ -0.55
VPS33A-201ENST00000267199 SOWAHBA6NEL2 793 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 RAMP2O60895 175 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 TPSB2P20231 275 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 SCNN1GP51170 649 aa11.63□□□□□ -0.55
VPS33A-201ENST00000267199 THOP1P52888 689 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms