RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 A0A1B0GTL3 188 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 PRSS51A0A1B0GVH4 220 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 FAM95CA0A1B0GW59 222 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 GIPC1O14908 333 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 IL18RAPO95256 599 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 PRSS56P0CW18 603 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 DESP17661 470 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 LRPAP1P30533 357 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 ARL1P40616 181 aaPredicted RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 KCNC1P48547 511 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 TKTL1P51854 596 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 KPNA1P52294 538 aaPredicted RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 ITKQ08881 620 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 ZC3HC1Q86WB0 502 aaKnown RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 OSTM1Q86WC4 334 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 PGAM4Q8N0Y7 254 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 FIBCD1Q8N539 461 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 KDM1BQ8NB78 822 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 GABPB2Q8TAK5 448 aaPredicted RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 ITFG2Q969R8 447 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 C2orf40Q9H1Z8 148 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 ALG9Q9H6U8 611 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 SMOXQ9NWM0 555 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 NUP214P35658 2090 aaPredicted RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 MRASO14807 208 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 MSI1O43347 362 aaKnown RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 SLC1A2P43004 574 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 RXRGP48443 463 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 FOXA1P55317 472 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 FOXD4Q12950 439 aaPredicted RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 CCDC153Q494R4 210 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 PKDCCQ504Y2 493 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 ANKRD34AQ69YU3 496 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 TTC33Q6PID6 262 aaPredicted RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 POTEHQ6S545 545 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 SIX6OS1Q8N1H7 587 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 C12orf43Q96C57 262 aaKnown RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 NSUN5Q96P11 429 aaKnown RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 ADAMTS5Q9UNA0 930 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 TOR1BO14657 336 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 ZNF182P17025 639 aaPredicted RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 MAGEA6P43360 314 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 NR1H2P55055 460 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 MAP7D1Q3KQU3 841 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 WSCD1Q658N2 575 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 RETREG3Q86VR2 466 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 PSTKQ8IV42 348 aaKnown RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 CNTD1Q8N815 330 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 RP9Q8TA86 221 aaKnown RBP13.11□□□□□ -0.31
SNX1-201ENST00000261889 ANKRD49Q8WVL7 239 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 DRC3Q9H069 523 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 KCTD3Q9Y597 815 aa13.11□□□□□ -0.31
SNX1-201ENST00000261889 PSMD12O00232 456 aaPredicted RBP13.1□□□□□ -0.31
SNX1-201ENST00000261889 HTRA2O43464 458 aaPredicted RBP13.1□□□□□ -0.31
SNX1-201ENST00000261889 BCAS2O75934 225 aaPredicted RBP13.1□□□□□ -0.31
SNX1-201ENST00000261889 ZBTB11O95625 1053 aaPredicted RBP13.1□□□□□ -0.31
SNX1-201ENST00000261889 SULT2A1Q06520 285 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 AAK1Q2M2I8 961 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 RABL3Q5HYI8 236 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 CHERPQ8IWX8 916 aaKnown RBP13.1□□□□□ -0.31
SNX1-201ENST00000261889 DDIASQ8IXT1 998 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 ACMSDQ8TDX5 336 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 TMEM74Q96NL1 305 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 CACNA2D2Q9NY47 1150 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 MPP6Q9NZW5 540 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 SLAMF8Q9P0V8 285 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 AASSQ9UDR5 926 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 ACOT9Q9Y305 439 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 GOLGA8CPA6NN73 597 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 ALDH4A1P30038 563 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 INCA1Q0VD86 236 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 FAM83EQ2M2I3 478 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 OR10Q1Q8NGQ4 319 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 MAGEE2Q8TD90 523 aaPredicted RBP13.1□□□□□ -0.31
SNX1-201ENST00000261889 CYP2S1Q96SQ9 504 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 OLFM1Q99784 485 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 PFDN4Q9NQP4 134 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 PRDM8Q9NQV8 689 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
SNX1-201ENST00000261889 RAB26Q9ULW5 256 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 OAZ3Q9UMX2 235 aa13.1□□□□□ -0.31
SNX1-201ENST00000261889 DDHD2O94830 711 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 H6PDO95479 791 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 LGALS2P05162 132 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 CCDC166P0CW27 439 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 ALOX15P16050 662 aaPredicted RBP13.09□□□□□ -0.31
SNX1-201ENST00000261889 CNTFP26441 200 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 CLCN2P51788 898 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 FPGSQ05932 587 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 NSUN2Q08J23 767 aaKnown RBP eCLIP13.09□□□□□ -0.31
SNX1-201ENST00000261889 BST2Q10589 180 aaKnown RBP13.09□□□□□ -0.31
SNX1-201ENST00000261889 APOFQ13790 326 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 TBCELQ5QJ74 424 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 KLC3Q6P597 504 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 PRR23BQ6ZRT6 265 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 AHI1Q8N157 1196 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 OR6P1Q8NGX9 317 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 DTNBP1Q96EV8 351 aa13.09□□□□□ -0.31
SNX1-201ENST00000261889 FRMD8Q9BZ67 464 aaPredicted RBP13.09□□□□□ -0.31
SNX1-201ENST00000261889 CYP3A43Q9HB55 503 aa13.09□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms