RNA–Protein interactions for RNA: ENST00000254667.7

PTPRE-201, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRE, Length 5,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-201ENST00000254667 ANAPC2Q9UJX6 822 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 GTF2A1LQ9UNN4 478 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 IGLV3-22A0A075B6J6 115 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 PEX6Q13608 980 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 INTS6LQ5JSJ4 861 aaKnown RBP19.1■□□□□ 0.65
PTPRE-201ENST00000254667 ADHFE1Q8IWW8 467 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 OR8D1Q8WZ84 308 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 C12orf42Q96LP6 360 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 MCCC1Q96RQ3 725 aaPredicted RBP19.1■□□□□ 0.65
PTPRE-201ENST00000254667 COPS8Q99627 209 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 TBC1D14Q9P2M4 693 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 KLHL3Q9UH77 587 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 LRCH1Q9Y2L9 728 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 UQCRBP14927 111 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 TPSB2P20231 275 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 IGFBP4P22692 258 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 JAK1P23458 1154 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 GABRR2P28476 465 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 TPSAB1Q15661 275 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 GSTA3Q16772 222 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 SLAIN1Q8ND83 568 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 CXorf40BQ96DE9 158 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 PADI3Q9ULW8 664 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 NDUFB5O43674 189 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 SNRPB2P08579 225 aaKnown RBP19.1■□□□□ 0.65
PTPRE-201ENST00000254667 CLK2P49760 499 aaKnown RBP19.1■□□□□ 0.65
PTPRE-201ENST00000254667 TRIM16LQ309B1 348 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 GPRIN3Q6ZVF9 776 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 MTF2Q9Y483 593 aaPredicted RBP19.1■□□□□ 0.65
PTPRE-201ENST00000254667 HDAC3O15379 428 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 PEX1O43933 1283 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 TCEA2Q15560 299 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 BHLHB9Q6PI77 547 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 GGA2Q9UJY4 613 aa19.1■□□□□ 0.65
PTPRE-201ENST00000254667 A0A0U1RQJ8 604 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 A0A1W2PQ67 120 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 URADA6NGE7 173 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 HS6ST1O60243 411 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 NDUFS2O75306 463 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 TNFAIP8O95379 198 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 PAICSP22234 425 aaKnown RBP19.09■□□□□ 0.65
PTPRE-201ENST00000254667 TALDO1P37837 337 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 FGD3Q5JSP0 725 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 KCTD4Q8WVF5 259 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 TMPRSS4Q9NRS4 437 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 GRM6O15303 877 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 RANBP1P43487 201 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 DHRSXQ8N5I4 330 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 CLEC4DQ8WXI8 215 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 MAML3Q96JK9 1138 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 CPXM1Q96SM3 734 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 REEP1Q9H902 201 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 BPIFA1Q9NP55 256 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 IL1BP01584 269 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 TAF10Q12962 218 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 SHROOM1Q2M3G4 852 aaPredicted RBP19.09■□□□□ 0.65
PTPRE-201ENST00000254667 MPPE1Q53F39 396 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 NOL9Q5SY16 702 aaKnown RBP19.09■□□□□ 0.65
PTPRE-201ENST00000254667 CYP2R1Q6VVX0 501 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 SLC26A9Q7LBE3 791 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 EXOC3L1Q86VI1 746 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 PTCD2Q8WV60 388 aaKnown RBP19.09■□□□□ 0.65
PTPRE-201ENST00000254667 ALG3Q92685 438 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 CSPG4P5Q96PW8 444 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 A0A1W2PQH9 124 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 FYNP06241 537 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 TEX44Q53QW1 395 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 PACS1Q6VY07 963 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 STK32AQ8WU08 396 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 CD101Q93033 1021 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 ZFRQ96KR1 1074 aaKnown RBP19.09■□□□□ 0.65
PTPRE-201ENST00000254667 TRMOQ9BU70 441 aa19.09■□□□□ 0.65
PTPRE-201ENST00000254667 TCRBV9S1A1TA0A576 114 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 MOXD2PA6NHM9 499 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 SYN3O14994 580 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 TREHO43280 583 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 PDE5AO76074 875 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 YBEYP58557 167 aaPredicted RBP19.08■□□□□ 0.65
PTPRE-201ENST00000254667 MAXP61244 160 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 BST1Q10588 318 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 KIAA1324Q6UXG2 1013 aaKnown RBP19.08■□□□□ 0.65
PTPRE-201ENST00000254667 LRRC74BQ6ZQY2 392 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 MARK2Q7KZI7 788 aaKnown RBP19.08■□□□□ 0.65
PTPRE-201ENST00000254667 DET1Q7L5Y6 550 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 NDNQ99608 321 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 RPS6KA6Q9UK32 745 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 A0A0G2JLL6 359 aaPredicted RBP19.08■□□□□ 0.65
PTPRE-201ENST00000254667 MBTD1Q05BQ5 628 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 PTP4A2Q12974 167 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 DUSP4Q13115 394 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 ARMCX4Q5H9R4 360 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 SH3BP5LQ7L8J4 393 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 PRRT2Q7Z6L0 340 aaPredicted RBP19.08■□□□□ 0.65
PTPRE-201ENST00000254667 YTHDF3Q7Z739 585 aaKnown RBP19.08■□□□□ 0.65
PTPRE-201ENST00000254667 COLGALT2Q8IYK4 626 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 MYO19Q96H55 970 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 MBOAT7Q96N66 472 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 ROGDIQ9GZN7 287 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 SNX15Q9NRS6 342 aa19.08■□□□□ 0.65
PTPRE-201ENST00000254667 STMN3Q9NZ72 180 aa19.08■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms