RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 MYLK3Q32MK0 819 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 HSF5Q4G112 596 aaPredicted RBP13.08□□□□□ -0.32
LSM8-201ENST00000249299 FBXO43Q4G163 708 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 DGKKQ5KSL6 1271 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 CFAP58Q5T655 872 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 LEKR1Q6ZMV7 388 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 ZNF534Q76KX8 674 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 CHFRQ96EP1 664 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 IFT43Q96FT9 208 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 MYO19Q96H55 970 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 TRIB3Q96RU7 358 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 OSBPL1AQ9BXW6 950 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 THEGQ9P2T0 379 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 SUN2Q9UH99 717 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 FCF1Q9Y324 198 aaKnown RBP13.08□□□□□ -0.32
LSM8-201ENST00000249299 TEX264Q9Y6I9 313 aa13.08□□□□□ -0.32
LSM8-201ENST00000249299 K7ERQ8 282 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 TRIM24O15164 1050 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 FZD6O60353 706 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 PMPCBO75439 489 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 NFKBIAP25963 317 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 SERPINA4P29622 427 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 CTSOP43234 321 aaPredicted RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 RGRP47804 291 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 GALK1P51570 392 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 PMS2P54278 862 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 BCL2L1Q07817 233 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 PDIA2Q13087 525 aaKnown RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 SLC1A5Q15758 541 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 HNRNPA1L2Q32P51 320 aaKnown RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 TMEM196Q5HYL7 178 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 FNBP1LQ5T0N5 605 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 ZNF449Q6P9G9 518 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 NLRP9Q7RTR0 991 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 HDXQ7Z353 690 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 TRMT11Q7Z4G4 463 aaKnown RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 DNAAF3Q8N9W5 541 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 IPMKQ8NFU5 416 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 OR2A12Q8NGT7 310 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 PYROXD1Q8WU10 500 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 RPL10LQ96L21 214 aaKnown RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 SIGLEC10Q96LC7 697 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 RANBP9Q96S59 729 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 EBNA1BP2Q99848 306 aaKnown RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 TDRD1Q9BXT4 1180 aaKnown RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 FUT8Q9BYC5 575 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 TMEM245Q9H330 911 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 PPCSQ9HAB8 311 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 FBRSQ9HAH7 460 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 MRM3Q9HC36 420 aaKnown RBP13.07□□□□□ -0.32
LSM8-201ENST00000249299 SLCO3A1Q9UIG8 710 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 RIMKLBQ9ULI2 386 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 RAI2Q9Y5P3 530 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 PIAS3Q9Y6X2 628 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 XIRP2A4UGR9 3374 aa13.07□□□□□ -0.32
LSM8-201ENST00000249299 EDDM13A0A1B0GTR0 161 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 GOLGA8MH3BSY2 632 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 SP100P23497 879 aaPredicted RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 STK19P49842 368 aaPredicted RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 SUOXP51687 545 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 EIF3BP55884 814 aaKnown RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 POLR2LP62875 67 aaKnown RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 GRSF1Q12849 480 aaKnown RBP eCLIP13.06□□□□□ -0.32
LSM8-201ENST00000249299 ELAVL3Q14576 367 aaKnown RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 ACCSLQ4AC99 568 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 ARMC12Q5T9G4 340 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 ALS2CLQ60I27 953 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 BRAT1Q6PJG6 821 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 CROCCP2Q86T23 111 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 CCDC25Q86WR0 208 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 GSPT2Q8IYD1 628 aaKnown RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 NDUFAF2Q8N183 169 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 TAB3Q8N5C8 712 aaPredicted RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 OR52K1Q8NGK4 314 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 ATXN2LQ8WWM7 1075 aaKnown RBP13.06□□□□□ -0.32
LSM8-201ENST00000249299 ECHDC3Q96DC8 303 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 HEPHQ9BQS7 1158 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 FICDQ9BVA6 458 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 KIFC1Q9BW19 673 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 TRABDQ9H4I3 376 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 SAYSD1Q9NPB0 183 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 UBP1Q9NZI7 540 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 HACD3Q9P035 362 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 DKK3Q9UBP4 350 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 DUSP12Q9UNI6 340 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 PPIL1Q9Y3C6 166 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 ACTL7AQ9Y615 435 aa13.06□□□□□ -0.32
LSM8-201ENST00000249299 FAM237BA0A1B0GVD1 139 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 TRAFD1O14545 582 aaPredicted RBP13.05□□□□□ -0.32
LSM8-201ENST00000249299 PAPSS2O95340 614 aaPredicted RBP13.05□□□□□ -0.32
LSM8-201ENST00000249299 AGTP01019 485 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 PRNPP04156 253 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 NUDT17P0C025 328 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 ATXN1LP0C7T5 689 aaKnown RBP13.05□□□□□ -0.32
LSM8-201ENST00000249299 IL9P15248 144 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 ADRA1DP25100 572 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 PHBP35232 272 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 GRIA4P48058 902 aa13.05□□□□□ -0.32
LSM8-201ENST00000249299 CCNHP51946 323 aaPredicted RBP13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms