RNA–Protein interactions for RNA: ENST00000156825.5

MBD3-201, Transcript of methyl-CpG binding domain protein 3, humanhuman

TSL 1 (best) BASIC

Gene MBD3, Length 5,518 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD3-201ENST00000156825 TFAP2BQ92481 460 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 ZMAT2Q96NC0 199 aaKnown RBP18.97■□□□□ 0.63
MBD3-201ENST00000156825 C2orf71A6NGG8 1288 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 NEDD8-MDP1E9PL57 170 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 DDX3YO15523 660 aaKnown RBP18.97■□□□□ 0.63
MBD3-201ENST00000156825 MC4RP32245 332 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 NDUFV1P49821 464 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 ELF3P78545 371 aaPredicted RBP18.97■□□□□ 0.63
MBD3-201ENST00000156825 DGCR6Q14129 220 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 MAGEE2Q8TD90 523 aaPredicted RBP18.97■□□□□ 0.63
MBD3-201ENST00000156825 AHCYL2Q96HN2 611 aaKnown RBP18.97■□□□□ 0.63
MBD3-201ENST00000156825 LPIN3Q9BQK8 851 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 MIR1-1HGQ9H1L0 117 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 KCND1Q9NSA2 647 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 EPN2O95208 641 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 PIK3CGP48736 1102 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 RHBDF2Q6PJF5 856 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 AFTPHQ6ULP2 937 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 OR8H2Q8N162 312 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 DPP10Q8N608 796 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 DHX33Q9H6R0 707 aaKnown RBP18.97■□□□□ 0.63
MBD3-201ENST00000156825 KRCC1Q9NPI7 259 aaPredicted RBP18.97■□□□□ 0.63
MBD3-201ENST00000156825 SAR1AQ9NR31 198 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 ADPRHL2Q9NX46 363 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 GNPTGQ9UJJ9 305 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 ROBO3Q96MS0 1386 aa18.97■□□□□ 0.63
MBD3-201ENST00000156825 H0Y858 1186 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 IDH2P48735 452 aaKnown RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 CRTC3Q6UUV7 619 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 EIF1ADQ8N9N8 165 aaKnown RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 UMPSP11172 480 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 SMPD1P17405 629 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 EPORP19235 508 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 PCBP1Q15365 356 aaKnown RBP eCLIP18.96■□□□□ 0.633e-6■■■■□ 23.3
MBD3-201ENST00000156825 PRMT9Q6P2P2 845 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 DCBLD1Q8N8Z6 715 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 HJURPQ8NCD3 748 aaPredicted RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 LINGO1Q96FE5 620 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CIDEBQ9UHD4 219 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CDK20Q8IZL9 346 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 OR4L1Q8NH43 312 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 ATXN2Q99700 1313 aaKnown RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 GLTPD2A6NH11 291 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CD3EAPO15446 510 aaKnown RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 HOXB8P17481 243 aaPredicted RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 WASP42768 502 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 EIF2B5Q13144 721 aaKnown RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 HEATR4Q86WZ0 1026 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CYP4X1Q8N118 509 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 DHRSXQ8N5I4 330 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CD99L2Q8TCZ2 262 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CERS4Q9HA82 394 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CHRAC1Q9NRG0 131 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CFAP97Q9P2B7 532 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CASP12Q6UXS9 341 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 CLVS1Q8IUQ0 354 aaPredicted RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 DGCR6LQ9BY27 220 aa18.96■□□□□ 0.63
MBD3-201ENST00000156825 AGO3Q9H9G7 860 aaKnown RBP18.96■□□□□ 0.63
MBD3-201ENST00000156825 RPN2P04844 631 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 NUDT17P0C025 328 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 COX4I1P13073 169 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 ARL2P36404 184 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 SLC5A3P53794 718 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 NOMO1Q15155 1222 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 WDR55Q9H6Y2 383 aaPredicted RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 SLC9A3R1O14745 358 aaPredicted RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 KIF1CO43896 1103 aaKnown RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 SLC25A14O95258 325 aaPredicted RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 PSMG1O95456 288 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 TNFRSF8P28908 595 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 HPCAL1P37235 193 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 SPDYCQ5MJ68 293 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 CIR1Q86X95 450 aaPredicted RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 C2orf73Q8N5S3 287 aaPredicted RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 AGAP11Q8TF27 550 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 PPP1R16AQ96I34 528 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 UGT2B28Q9BY64 529 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 LHX5Q9H2C1 402 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 XPNPEP1Q9NQW7 623 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 RPL17P18621 184 aaKnown RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 MAPK11Q15759 364 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 MAPKAPK3Q16644 382 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 TRABD2AQ86V40 505 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 MREGQ8N565 214 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 PLD5Q8N7P1 536 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 SPATA22Q8NHS9 363 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 ASB2Q96Q27 587 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 KCTD15Q96SI1 283 aaPredicted RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 GLOD4Q9HC38 313 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 CYLDQ9NQC7 956 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 ENTPD4Q9Y227 616 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 VWA7Q9Y334 891 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 KRT36O76013 467 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 UNC5CO95185 931 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 TMED10P49755 219 aaKnown RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 XKR6Q5GH73 641 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 HLA-DQA1Q5Y7H0 255 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 PPP1R3FQ6ZSY5 799 aaPredicted RBP18.95■□□□□ 0.62
MBD3-201ENST00000156825 SAPCD2Q86UD0 394 aa18.95■□□□□ 0.62
MBD3-201ENST00000156825 EPHX4Q8IUS5 362 aa18.95■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms