RNA–Protein interactions for RNA: ENST00000626620.3

KCNMA1-225, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KCNMA1, Length 3,660 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-225ENST00000626620 ZSWIM9Q86XI8 627 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 CCNYQ8ND76 341 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 CCDC110Q8TBZ0 833 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 SHDQ96IW2 340 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 FCRL5Q96RD9 977 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 CPEB1Q9BZB8 566 aaKnown RBP10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 CIPCQ9C0C6 399 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 IRF2BPLQ9H1B7 796 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 GBA3Q9H227 469 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 LMAN1LQ9HAT1 526 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 RBM22Q9NW64 420 aaKnown RBP eCLIP10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 SARDHQ9UL12 918 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 PPM1HQ9ULR3 514 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 MMP17Q9ULZ9 603 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 WDR87Q6ZQQ6 2873 aa10.72□□□□□ -0.69
KCNMA1-225ENST00000626620 TSPAN11A1L157 253 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 TARSL2A2RTX5 802 aaKnown RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 FAM170BA6NMN3 283 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 H7C0C1 242 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 MTSS1O43312 755 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 TIE1P35590 1138 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 ATP5OP48047 213 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 GEMIN4P57678 1058 aaKnown RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 PTK6Q13882 451 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 Q6ZVU0 165 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 METTL3Q86U44 580 aaKnown RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 ZNF366Q8N895 744 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 RPLP0P6Q8NHW5 317 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 NELL2Q99435 816 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 HINFPQ9BQA5 517 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 TNKS2Q9H2K2 1166 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 NOD2Q9HC29 1040 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 GLOD4Q9HC38 313 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 SLC25A13Q9UJS0 675 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 TRHDEQ9UKU6 1024 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 HPCAL4Q9UM19 191 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 FARP1Q9Y4F1 1045 aaPredicted RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 TNRC6BQ9UPQ9 1833 aaKnown RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 PLXNA2O75051 1894 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 SPINT1O43278 529 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 HTRA2O43464 458 aaPredicted RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 SIN3BO75182 1162 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 PAPSS2O95340 614 aaPredicted RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 SYF2O95926 243 aaKnown RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 NTSR1P30989 418 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 ATXN7L2Q5T6C5 722 aaPredicted RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 HEATR6Q6AI08 1181 aaKnown RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 DPY19L3Q6ZPD9 716 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 ATP11CQ8NB49 1132 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 RSPH9Q9H1X1 276 aaPredicted RBP10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 SEPT3Q9UH03 358 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 ADAM21Q9UKJ8 722 aa10.71□□□□□ -0.69
KCNMA1-225ENST00000626620 PIEZO1Q92508 2521 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 RAD51CO43502 376 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 METAP1P53582 386 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 MAXP61244 160 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 CARD16Q5EG05 197 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 CCDC117Q8IWD4 279 aaPredicted RBP10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 OR2AP1Q8NGE2 309 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 SLC25A51Q9H1U9 297 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 PCDH9Q9HC56 1237 aa10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 NDRG2Q9UN36 371 aaKnown RBP10.71□□□□□ -0.7
KCNMA1-225ENST00000626620 OPHN1O60890 802 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 ZNF189O75820 626 aaPredicted RBP10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 MRPS25P82663 173 aaKnown RBP10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 DSC2Q02487 901 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 MYLK3Q32MK0 819 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 RALGPS1Q5JS13 557 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 ZNF534Q76KX8 674 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 SYT13Q7L8C5 426 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 TXNDC5Q8NBS9 432 aaKnown RBP10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 KRT12Q99456 494 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 NT5MQ9NPB1 228 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 EDDM13A0A1B0GTR0 161 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 LOC285095A0A1B0GVY8 99 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 PRR23AA6NEV1 266 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 K7ESF4 209 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 ALOX15BO15296 676 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 TTI1O43156 1089 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 KLF8O95600 359 aaPredicted RBP10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 NFKB1P19838 968 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 GKP32189 559 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 HSPA9P38646 679 aaKnown RBP10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 PAFAH1B1P43034 410 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 SEMA5AQ13591 1074 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 DENND5AQ6IQ26 1287 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 SRLQ86TD4 932 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 MRGPRX2Q96LB1 330 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 PPIL1Q9Y3C6 166 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 AGPSO00116 658 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 SUN1O94901 812 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 FAM193AP78312 1265 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 CKAP4Q07065 602 aaKnown RBP10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 DHX34Q14147 1143 aaKnown RBP10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 KCNJ11Q14654 390 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 DUPD1Q68J44 220 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 JAMLQ86YT9 394 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 SPATA22Q8NHS9 363 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 EXOC2Q96KP1 924 aa10.7□□□□□ -0.7
KCNMA1-225ENST00000626620 AGAP3Q96P47 875 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms