RNA–Protein interactions for RNA: ENST00000621897.1

BRCA1-229, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 375 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-229ENST00000621897 KIF1CO43896 1103 aaKnown RBP4.58□□□□□ -1.68
BRCA1-229ENST00000621897 SERPINI2O75830 405 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 GRK6P43250 576 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 TUBA1BP68363 451 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 ADORA2A-AS1P86434 159 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 CYP4A11Q02928 519 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 SLC18A3Q16572 532 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 FAM76BQ5HYJ3 339 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 TYW3Q6IPR3 259 aaKnown RBP4.58□□□□□ -1.68
BRCA1-229ENST00000621897 SPSB3Q6PJ21 355 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 CUZD1Q86UP6 607 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 MON1AQ86VX9 555 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 YME1L1Q96TA2 773 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 ITM2CQ9NQX7 267 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 TMEM51Q9NW97 253 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 SLC45A1Q9Y2W3 748 aa4.58□□□□□ -1.68
BRCA1-229ENST00000621897 RRP7AQ9Y3A4 280 aaKnown RBP4.58□□□□□ -1.68
BRCA1-229ENST00000621897 MORC2Q9Y6X9 1032 aaPredicted RBP4.58□□□□□ -1.68
BRCA1-229ENST00000621897 LOC102724159A0A0B4J2E5 919 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 A0A1B0GVM2 712 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 NBNO60934 754 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 DDNO94850 711 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 LDHAP00338 332 aaKnown RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 TTKP33981 857 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 CENPAP49450 140 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 KRTAP10-7P60409 375 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 GOLGA8FQ08AF8 430 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 HYAL1Q12794 435 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 PWP2Q15269 919 aaKnown RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 ADCK5Q3MIX3 580 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 NCAPH2Q6IBW4 605 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 RETSATQ6NUM9 610 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 TMED8Q6PL24 325 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 TCP11L2Q8N4U5 519 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 DNAAF1Q8NEP3 725 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 LILRB1Q8NHL6 650 aaPredicted RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 WFIKKN2Q8TEU8 576 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 HSPH1Q92598 858 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 TBC1D20Q96BZ9 403 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 COG8Q96MW5 612 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 STN1Q9H668 368 aaKnown RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 GAREM1Q9H706 876 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 DDX31Q9H8H2 851 aaKnown RBP4.57□□□□□ -1.68
BRCA1-229ENST00000621897 RASSF1Q9NS23 344 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 CNPY2Q9Y2B0 182 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 GDAQ9Y2T3 454 aa4.57□□□□□ -1.68
BRCA1-229ENST00000621897 FAM90A7PA6NKC0 464 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 FAM90A22PA8MWA6 464 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 FAM90A12PA8MX19 464 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 FAM90A23PA8MXZ1 464 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 DHRS4L1P0CG22 281 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 SLC39A14Q15043 492 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 KIF19Q2TAC6 998 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 PLEKHO1Q53GL0 409 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-229ENST00000621897 ZNF628Q5EBL2 1059 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 C2CD5Q86YS7 1000 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 DENND6AQ8IWF6 608 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 MB21D2Q8IYB1 491 aaPredicted RBP4.56□□□□□ -1.68
BRCA1-229ENST00000621897 GDPD5Q8WTR4 605 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 DNASE2BQ8WZ79 361 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 RNF183Q96D59 192 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 RPS6KC1Q96S38 1066 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 ARPC5LQ9BPX5 153 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP4.56□□□□□ -1.68
BRCA1-229ENST00000621897 ENTPD7Q9NQZ7 604 aa4.56□□□□□ -1.68
BRCA1-229ENST00000621897 ADGRF5Q8IZF2 1346 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 A0A0U1RQJ8 604 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 VWA3AA6NCI4 1184 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 PEX12O00623 359 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 SLC16A5O15375 505 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 KLK10O43240 276 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 ANP32CO43423 234 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 ZNF432O94892 652 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 AFPP02771 609 aaKnown RBP4.55□□□□□ -1.68
BRCA1-229ENST00000621897 CNPP09543 421 aaKnown RBP4.55□□□□□ -1.68
BRCA1-229ENST00000621897 RPL3P39023 403 aaKnown RBP4.55□□□□□ -1.68
BRCA1-229ENST00000621897 CXCR3P49682 368 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 DDR1Q08345 913 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 SETMARQ53H47 684 aaPredicted RBP4.55□□□□□ -1.68
BRCA1-229ENST00000621897 EFHC1Q5JVL4 640 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 CHD1LQ86WJ1 897 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 PGBD5Q8N414 524 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 AADATQ8N5Z0 425 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 ZNF114Q8NC26 417 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 ARRDC2Q8TBH0 407 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 TMEM170AQ8WVE7 144 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 CCT6BQ92526 530 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 MROH8Q9H579 483 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 SLC32A1Q9H598 525 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 KCNG2Q9UJ96 466 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 ICAM5Q9UMF0 924 aa4.55□□□□□ -1.68
BRCA1-229ENST00000621897 WDR81Q562E7 1941 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 DENND3A2RUS2 1198 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 NPIPB11E5RHQ5 1161 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 PER2O15055 1255 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 TCEA3O75764 348 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 CH25HO95992 272 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 CHRM4P08173 479 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 WEE2P0C1S8 567 aa4.54□□□□□ -1.68
BRCA1-229ENST00000621897 MYF6P23409 242 aa4.54□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms