RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 CALN1Q9BXU9 219 aa15.96■□□□□ 0.15
RPS28-203ENST00000600659 CPEB1Q9BZB8 566 aaKnown RBP15.96■□□□□ 0.15
RPS28-203ENST00000600659 LACRTQ9GZZ8 138 aa15.96■□□□□ 0.15
RPS28-203ENST00000600659 GGT7Q9UJ14 662 aa15.96■□□□□ 0.15
RPS28-203ENST00000600659 TBC1D3DA0A087WVF3 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3IA0A087WXS9 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3EA0A087X179 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3KA0A087X1G2 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 A0A0U1RQJ8 604 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 A0A1B0GVT2 93 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 DCDC2BA2VCK2 349 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3FA6NER0 549 aaPredicted RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 ZNF487B1APH4 448 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3LB9A6J9 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 AREL1O15033 823 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 AP1G1O43747 822 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3HP0C7X1 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 CR2P20023 1033 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 MAT2AP31153 395 aaKnown RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 SERPINB6P35237 376 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 CSNK1DP48730 415 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 CSNK1EP49674 416 aaKnown RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 AFF3P51826 1226 aaKnown RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 RACK1P63244 317 aaKnown RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 GBE1Q04446 702 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 FGL2Q14314 439 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 RFTN1Q14699 578 aaPredicted RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 ZNF284Q2VY69 593 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TMCO4Q5TGY1 634 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3GQ6DHY5 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3CQ6IPX1 549 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 ZSWIM9Q86XI8 627 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 TBC1D3Q8IZP1 549 aaPredicted RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 MINDY1Q8N5J2 469 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 PLD5Q8N7P1 536 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 KLHL32Q96NJ5 620 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 ZNF599Q96NL3 588 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 RNF157Q96PX1 679 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 PSKH2Q96QS6 385 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 OSBPL1AQ9BXW6 950 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 DNAAF2Q9NVR5 837 aaKnown RBP15.95■□□□□ 0.14
RPS28-203ENST00000600659 ITM2BQ9Y287 266 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 DUSP10Q9Y6W6 482 aa15.95■□□□□ 0.14
RPS28-203ENST00000600659 A0A1W2PQU0 124 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 RNGTTO60942 597 aaKnown RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 PALMO75781 387 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 MAP3K6O95382 1288 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 SDHBP21912 280 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 SLC1A1P43005 524 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 MARCKSL1P49006 195 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 LBRQ14739 615 aaKnown RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 TAZQ16635 292 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 KIF19Q2TAC6 998 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 SEL1L3Q68CR1 1132 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 SLC9A4Q6AI14 798 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 NEK5Q6P3R8 708 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 GDPD4Q6W3E5 623 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 HORMAD1Q86X24 394 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 VSIG1Q86XK7 387 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 RYBPQ8N488 228 aaPredicted RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 ATPAF2Q8N5M1 289 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 TMEM145Q8NBT3 493 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 KCTD6Q8NC69 237 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 TPCN2Q8NHX9 752 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 BAG1Q99933 345 aaPredicted RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 IL21RQ9HBE5 538 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 DYRK4Q9NR20 520 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 DKK3Q9UBP4 350 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 TPX2Q9ULW0 747 aaKnown RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 ALG6Q9Y672 507 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 ARID1BQ8NFD5 2236 aaPredicted RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 NCOR2Q9Y618 2525 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 LRRD1A4D1F6 860 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 BTNL10A8MVZ5 291 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 TRAFD1O14545 582 aaPredicted RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 PJA2O43164 708 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 TIMP2P16035 220 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 ITIH2P19823 946 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 GARSP41250 739 aaKnown RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 CTSKP43235 329 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 SPA17Q15506 151 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 LRRC73Q5JTD7 316 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 NAPEPLDQ6IQ20 393 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 C11orf63Q6NUN7 778 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 SRLQ86TD4 932 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 TEX26Q8N6G2 289 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 LRRN4Q8WUT4 740 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 MAML1Q92585 1016 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 ECHDC3Q96DC8 303 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 MGME1Q9BQP7 344 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 ANP32EQ9BTT0 268 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 CINPQ9BW66 212 aaPredicted RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 GTPBP2Q9BX10 602 aaKnown RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 ZDHHC5Q9C0B5 715 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 DTLQ9NZJ0 730 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 CA5BQ9Y2D0 317 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 ANKRD6Q9Y2G4 727 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 FNDC3AQ9Y2H6 1198 aaKnown RBP15.94■□□□□ 0.14
RPS28-203ENST00000600659 SNX11Q9Y5W9 270 aa15.94■□□□□ 0.14
RPS28-203ENST00000600659 TTC24A2A3L6 582 aaPredicted RBP15.93■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms